An introduction to spatial transcriptomics for biomedical research

• Next-generation kidney tissue analysis — spatial omics and digital pathology

  2026 Nature Reviews Nephrology review Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics

  1

  citations
• From prediction to precision: Biomarker discovery and predictive modeling for personalized immune checkpoint blockade therapy

  2026 European Journal of Cancer article Medicine Cancer Immunotherapy and Biomarkers

  4

  citations
• Cell type heterogeneity in gene co-expression networks: implications for toxicological research

  2025 Briefings in Bioinformatics article Biochemistry, Genetics and Molecular Biology Bioinformatics and Genomic Networks Open access

  3

  citations
• Spatial transcriptomic characterization of pathologic niches in IPF

  2024 Science Advances article Medicine Interstitial Lung Diseases and Idiopathic Pulmonary Fibrosis Open access cited by 1 patent

  106

  citations
• Application of spatial-omics to the classification of kidney biopsy samples in transplantation

  2024 Nature Reviews Nephrology review Medicine Renal Transplantation Outcomes and Treatments

  16

  citations
• Spatial Transcriptomic Characterization of Novel Pathologic Niches in IPF

  2023 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine Interstitial Lung Diseases and Idiopathic Pulmonary Fibrosis Open access

  1

  citations

6 results

• SpaGE: Spatial Gene Enhancement using scRNA-seq

  2020 Nucleic Acids Research article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access cited by 4 patents

  223

  citations
• Explainable multi-view framework for dissecting intercellular signaling from highly multiplexed spatial data

  2021 Research Square preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access

  10

  citations

2 results