Opportunities and challenges in long-read sequencing data analysis

• Nanopore event detection in a simple and adaptive way

  2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Engineering Nanopore and Nanochannel Transport Studies Open access

  0

  citations
• Temporal dynamics of collateral RNA cleavage by LbuCas13a in human cells

  2026 Communications Biology article Biochemistry, Genetics and Molecular Biology CRISPR and Genetic Engineering Open access

  11

  citations
• Towards epigenetics in sugar beet – the ONT based reference 5mC methylome of Beta vulgaris ssp. vulgaris

  2026 Current Plant Biology article Biochemistry, Genetics and Molecular Biology Epigenetics and DNA Methylation Open access

  1

  citations
• Robust, credible, and interpretable AI-based histopathological prostate cancer grading

  2024 medRxiv preprint Computer Science AI in cancer detection Open access

  1

  citations
• Multiple graphical views for automatically generating SQL for the MycoDiversity DB; making fungal biodiversity studies accessible

  2024 Biodiversity Data Journal article Agricultural and Biological Sciences Mycorrhizal Fungi and Plant Interactions Open access

  0

  citations
• A Perspective on graphene junctions for recognition tunneling

  2024 Applied Physics Letters article Engineering Nanopore and Nanochannel Transport Studies Open access

  2

  citations
• A host shift as the origin of tomato bacterial canker caused by Clavibacter michiganensis

  2023 bioRxiv (Cold Spring Harbor Laboratory) preprint Agricultural and Biological Sciences Plant Pathogenic Bacteria Studies Open access

  0

  citations
• Temporal dynamics of collateral RNA cleavage by LbuCas13a in human cells

  2023 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology CRISPR and Genetic Engineering Open access

  5

  citations
• Interspecific introgression of MHC genes in Triturus newts: Evidence from multiple contact zones

  2022 Molecular Ecology article Biochemistry, Genetics and Molecular Biology Genetic diversity and population structure Open access

  15

  citations
• SASpector: analysis of missing genomic regions in draft genomes of prokaryotes

  2022 Bioinformatics article Biochemistry, Genetics and Molecular Biology Genomics and Phylogenetic Studies Open access

  1

  citations
• MOJITOO: a fast and universal method for integration of multimodal single cell data

  2022 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access

  3

  citations
• Megafaunal extinctions—not climate change—seem to explain Holocene genetic diversity declines in Numenius shorebirds

  2021 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Genetic diversity and population structure Open access

  0

  citations
• Long-read sequencing to understand genome biology and cell function

  2020 The International Journal of Biochemistry & Cell Biology article Biochemistry, Genetics and Molecular Biology Genomics and Phylogenetic Studies

  35

  citations
• CACTUS: integrating clonal architecture with genomic clustering and transcriptome profiling of single tumor cells

  2020 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access

  4

  citations

14 results