QuPath: Open source software for digital pathology image analysis

• From whole-slide image to biomarker prediction: end-to-end weakly supervised deep learning in computational pathology

  2024 Nature Protocols article Computer Science AI in cancer detection

  105

  citations
• Semi-automatic standardized analysis method to objectively evaluate near-infrared fluorescent dyes in image-guided surgery

  2024 Journal of Biomedical Optics article Medicine Optical Imaging and Spectroscopy Techniques Open access

  13

  citations
• Neoadjuvant atezolizumab plus chemotherapy in gastric and gastroesophageal junction adenocarcinoma: the phase 2 PANDA trial

  2024 Nature Medicine article Medicine Gastric Cancer Management and Outcomes Open access

  123

  citations
• Phosphatidylinositolmannoside vaccination induces lipid-specific Th1-responses and partially protects guinea pigs from Mycobacterium tuberculosis challenge

  2023 Scientific Reports article Medicine Tuberculosis Research and Epidemiology Open access

  4

  citations
• Prediction of Biomarker Expression on Primary Pancreatic Ductal Adenocarcinoma Tissues Using Fine-Needle Biopsies: Paving the Way for a Patient-Tailored Molecular Imaging Approach

  2023 Molecular Diagnosis & Therapy article Medicine Pancreatic and Hepatic Oncology Research Open access

  5

  citations
• Multistain deep learning for prediction of prognosis and therapy response in colorectal cancer

  2023 Nature Medicine article Computer Science AI in cancer detection cited by 1 patent

  269

  citations
• MeVa2.1.dOVA and MeVa2.2.dOVA: two novel BRAFV600E-driven mouse melanoma cell lines to study tumor immune resistance

  2022 Melanoma Research article Medicine Cancer Immunotherapy and Biomarkers

  4

  citations
• Does PARP Inhibition Sensitize Chondrosarcoma Cell Lines to Chemotherapy or Radiotherapy? Results From a Three-dimensional Spheroid Cell Model

  2022 Clinical Orthopaedics and Related Research article Medicine Bone Tumor Diagnosis and Treatments Open access

  12

  citations
• Artificial intelligence in histopathology: enhancing cancer research and clinical oncology

  2022 Nature Cancer article Computer Science AI in cancer detection cited by 1 patent

  454

  citations
• PHGDH heterogeneity potentiates cancer cell dissemination and metastasis

  2022 Nature article Biochemistry, Genetics and Molecular Biology Cancer, Hypoxia, and Metabolism Open access

  223

  citations
• A murine mesenchymal stem cell model for initiating events in osteosarcomagenesis points to CDK4/CDK6 inhibition as a therapeutic target

  2021 Laboratory Investigation article Medicine Sarcoma Diagnosis and Treatment Open access

  17

  citations
• Deep learning identifies inflamed fat as a risk factor for lymph node metastasis in early colorectal cancer

  2021 The Journal of Pathology article Computer Science AI in cancer detection Open access

  78

  citations
• Application of 3D MAPs pipeline identifies the morphological sequence chondrocytes undergo and the regulatory role of GDF5 in this process

  2021 Nature Communications article Biochemistry, Genetics and Molecular Biology Cell Image Analysis Techniques Open access

  20

  citations
• Deep Learning–Based Segmentation and Quantification in Experimental Kidney Histopathology

  2020 Journal of the American Society of Nephrology article Computer Science AI in cancer detection Open access

  187

  citations
• Associations of non-pedunculated T1 colorectal adenocarcinoma outcome with consensus molecular subtypes, immunoscore, and microsatellite status: a multicenter case-cohort study

  2020 Modern Pathology article Medicine Genetic factors in colorectal cancer Open access cited by 2 patents

  30

  citations

15 results