Transcript-level expression analysis of RNA-seq experiments with HISAT, StringTie and Ballgown

• The Gongora gibba genome assembly provides new insights into the evolution of floral scent in male euglossine bee–pollinated orchids

  2024 G3 Genes Genomes Genetics article Agricultural and Biological Sciences Chromosomal and Genetic Variations Open access

  5

  citations
• The centromere landscapes of four karyotypically diverse Papaver species provide insights into chromosome evolution and speciation

  2024 Cell Genomics article Agricultural and Biological Sciences Chromosomal and Genetic Variations Open access

  9

  citations
• Symmetric expression of ohnologs encoding conserved antiviral responses in tetraploid common carp suggest absence of subgenome dominance after whole genome duplication

  2023 Genomics article Agricultural and Biological Sciences Chromosomal and Genetic Variations Open access

  9

  citations
• Genome-wide analysis identifies genetic effects on reproductive success and ongoing natural selection at the FADS locus

  2023 Nature Human Behaviour article Biochemistry, Genetics and Molecular Biology Genetic Associations and Epidemiology Open access

  62

  citations
• A Solanum lycopersicoides reference genome facilitates insights into tomato specialized metabolism and immunity

  2022 The Plant Journal article Biochemistry, Genetics and Molecular Biology Genetic Mapping and Diversity in Plants and Animals Open access

  35

  citations
• Capsicum Leaves under Stress: Using Multi-Omics Analysis to Detect Abiotic Stress Network of Secondary Metabolism in Two Species

  2022 Antioxidants article Agricultural and Biological Sciences Plant Stress Responses and Tolerance Open access

  26

  citations
• GXP: Analyze and Plot Plant Omics Data in Web Browsers

  2022 Plants article Biochemistry, Genetics and Molecular Biology Bioinformatics and Genomic Networks Open access

  1

  citations
• Three chromosome-scale Papaver genomes reveal punctuated patchwork evolution of the morphinan and noscapine biosynthesis pathway

  2021 Nature Communications article Agricultural and Biological Sciences Chromosomal and Genetic Variations Open access

  102

  citations
• Tomato leaves under stress: a comparison of stress response to mild abiotic stress between a cultivated and a wild tomato species

  2021 Plant Molecular Biology article Agricultural and Biological Sciences Plant Stress Responses and Tolerance Open access

  26

  citations
• Tomato leaves under stress: A comparison of stress response to mild abiotic stress between a cultivated and a wild tomato species

  2021 bioRxiv (Cold Spring Harbor Laboratory) preprint Agricultural and Biological Sciences Plant Stress Responses and Tolerance Open access

  1

  citations
• Genetic insights into biological mechanisms governing human ovarian ageing

  2021 Nature article Medicine Reproductive Biology and Fertility Open access cited by 1 patent

  426

  citations
• Giant lungfish genome elucidates the conquest of land by vertebrates

  2021 Nature article Agricultural and Biological Sciences Chromosomal and Genetic Variations Open access

  243

  citations
• Genetic insights into the biological mechanisms governing human ovarian ageing

  2021 medRxiv preprint Medicine Reproductive Biology and Fertility Open access

  35

  citations
• Safety and Efficacy of CR6261 in an Influenza A H1N1 Healthy Human Challenge Model

  2020 Clinical Infectious Diseases article Medicine Influenza Virus Research Studies Open access

  54

  citations
• Genome-wide alternative splicing profiling in the fungal plant pathogen Sclerotinia sclerotiorum during the colonization of diverse host families

  2020 bioRxiv (Cold Spring Harbor Laboratory) preprint Agricultural and Biological Sciences Plant pathogens and resistance mechanisms Open access

  2

  citations
• Parallel Metabolomic and Transcriptomic Analysis Reveals Key Factors for Quality Improvement of Tea Plants

  2020 Journal of Agricultural and Food Chemistry article Biochemistry, Genetics and Molecular Biology Plant Gene Expression Analysis

  19

  citations

16 results