Network biology: understanding the cell's functional organization

• The effect of distant connections on node anonymity in complex networks

  2024 Scientific Reports article Computer Science Privacy-Preserving Technologies in Data Open access

  1

  citations
• Exploring pathway interactions to detect molecular mechanisms of disease: 22q11.2 deletion syndrome

  2023 Orphanet Journal of Rare Diseases article Biochemistry, Genetics and Molecular Biology Bioinformatics and Genomic Networks Open access

  2

  citations
• Mapping explanatory language in neuroscience

  2023 Synthese article Arts and Humanities Philosophy and History of Science Open access

  4

  citations
• MultiGML: Multimodal graph machine learning for prediction of adverse drug events

  2023 Heliyon article Computer Science Computational Drug Discovery Methods Open access

  22

  citations
• The Network Zoo: a multilingual package for the inference and analysis of gene regulatory networks

  2023 Genome biology article Biochemistry, Genetics and Molecular Biology Gene Regulatory Network Analysis Open access

  56

  citations
• Population-level comparisons of gene regulatory networks modeled on high-throughput single-cell transcriptomics data

  2023 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Gene Regulatory Network Analysis Open access

  2

  citations
• MultiGML: Multimodal Graph Machine Learning for Prediction of Adverse Drug Events

  2022 bioRxiv (Cold Spring Harbor Laboratory) preprint Computer Science Computational Drug Discovery Methods Open access

  3

  citations
• Exploring Pathway Interactions to Detect Molecular Mechanisms of Disease: 22q11.2 Deletion Syndrome

  2022 Research Square preprint Biochemistry, Genetics and Molecular Biology Bioinformatics and Genomic Networks Open access

  1

  citations
• The Network Zoo: a multilingual package for the inference and analysis of biological networks

  2022 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Gene Regulatory Network Analysis Open access

  1

  citations
• Functional Structure in Production Networks

  2021 Frontiers in Big Data article Physics and Astronomy Complex Network Analysis Techniques Open access

  15

  citations
• On Path to Informing Hierarchy of Eplet Mismatches as Determinants of Kidney Transplant Loss

  2021 Kidney International Reports article Medicine Renal Transplantation Outcomes and Treatments Open access cited by 2 patents

  41

  citations
• How higher goals are constructed and collapse under stress: A hierarchical Bayesian control systems perspective

  2021 Neuroscience & Biobehavioral Reviews article Neuroscience Embodied and Extended Cognition Open access

  31

  citations
• Functional structure in production networks

  2021 Leiden Repository (Leiden University) article Physics and Astronomy Complex Network Analysis Techniques Open access

  13

  citations
• Statistical Physics for Medical Diagnostics: Learning, Inference, and Optimization Algorithms

  2020 Diagnostics article Health Professions Artificial Intelligence in Healthcare Open access

  6

  citations
• Structural conserved moiety splitting of a stoichiometric matrix

  2020 Journal of Theoretical Biology article Biochemistry, Genetics and Molecular Biology Gene Regulatory Network Analysis Open access

  7

  citations

15 results