January 16, 2014 article Open access Fast Reconstruction of Compact Context-Specific Metabolic Network Models PLoS Computational Biology DOI: 10.1371/journal.pcbi.1003424 Full text (OA) OpenAlex Authors 0 Author list not loaded yet. Cited by 9 stored of 258 Search Sort Most cited Newest Oldest Patent citations Title Any typearticle review book-chapter conference-paper preprint dissertation book dataset other Any fieldAgricultural and Biological Sciences Arts and Humanities Biochemistry, Genetics and Molecular Biology Business, Management and Accounting Chemical Engineering Chemistry Computer Science Decision Sciences Dentistry Earth and Planetary Sciences Economics, Econometrics and Finance Energy Engineering Environmental Science Health Professions Immunology and Microbiology Materials Science Mathematics Medicine Neuroscience Nursing Pharmacology, Toxicology and Pharmaceutics Physics and Astronomy Psychology Social Sciences Veterinary Open access XomicsToModel: omics data integration and generation of thermodynamically consistent metabolic models 2025 Nature Protocols article Biochemistry, Genetics and Molecular Biology Microbial Metabolic Engineering and Bioproduction Open access 5 citations Constraint-based modeling of bioenergetic differences between synaptic and non-synaptic components of dopaminergic neurons in Parkinson’s disease 2025 Frontiers in Computational Neuroscience article Medicine Parkinson's Disease Mechanisms and Treatments Open access 3 citations Identification of metabolites reproducibly associated with Parkinson’s Disease via meta-analysis and computational modelling 2024 npj Parkinson s Disease review Medicine Parkinson's Disease Mechanisms and Treatments Open access 34 citations Cardinality optimization in constraint-based modelling: application to human metabolism 2023 Bioinformatics article Biochemistry, Genetics and Molecular Biology Microbial Metabolic Engineering and Bioproduction Open access 10 citations Identification of metabolites reproducibly associated with Parkinson’s Disease via meta-analysis and computational modelling 2023 Research Square preprint Medicine Parkinson's Disease Mechanisms and Treatments Open access 2 citations XomicsToModel: Omics data integration and generation of thermodynamically consistent metabolic models 2021 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Microbial Metabolic Engineering and Bioproduction Open access 10 citations Mechanistic model-driven exometabolomic characterisation of human dopaminergic neuronal metabolism 2021 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Microbial Metabolic Engineering and Bioproduction Open access 12 citations Personalized whole‐body models integrate metabolism, physiology, and the gut microbiome 2020 Molecular Systems Biology article Biochemistry, Genetics and Molecular Biology Microbial Metabolic Engineering and Bioproduction Open access cited by 4 patents 218 citations Fibroblast‐specific genome‐scale modelling predicts an imbalance in amino acid metabolism in Refsum disease 2020 FEBS Journal article Biochemistry, Genetics and Molecular Biology Metabolism and Genetic Disorders Open access 15 citations 9 results References 0