Is My Network Module Preserved and Reproducible?

• Utilizing rat kidney gene co-expression networks to enhance safety assessment biomarker identification and human translation

  2025 iScience article Biochemistry, Genetics and Molecular Biology Bioinformatics and Genomic Networks Open access

  4

  citations
• A network-based transcriptomic landscape of HepG2 cells uncovering causal gene-cytotoxicity interactions underlying drug-induced liver injury

  2023 Toxicological Sciences article Pharmacology, Toxicology and Pharmaceutics Drug-Induced Hepatotoxicity and Protection Open access

  13

  citations
• Utilizing gene co-expression networks with the rat kidney TXG-MAPr tool to enhance safety assessment, biomarker identification and human translation

  2023 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Bioinformatics and Genomic Networks Open access

  1

  citations
• Toxicogenomics Approaches to Address Toxicity and Carcinogenicity in the Liver

  2023 Toxicologic Pathology article Biochemistry, Genetics and Molecular Biology Carcinogens and Genotoxicity Assessment Open access

  8

  citations
• S24-02: Gene network approaches predictive of adverse outcomes

  2023 Toxicology Letters article Biochemistry, Genetics and Molecular Biology Bioinformatics and Genomic Networks

  0

  citations
• Identifying multiscale translational safety biomarkers using a network-based systems approach

  2023 iScience article Pharmacology, Toxicology and Pharmaceutics Drug-Induced Hepatotoxicity and Protection Open access

  14

  citations
• A Network-based Transcriptomic Landscape of HepG2 cells to Uncover Causal Gene Cytotoxicity Interactions Underlying Drug-Induced Liver Injury

  2023 bioRxiv (Cold Spring Harbor Laboratory) preprint Pharmacology, Toxicology and Pharmaceutics Drug-Induced Hepatotoxicity and Protection Open access

  1

  citations
• Huntington Disease Gene Expression Signatures in Blood Compared to Brain of YAC128 Mice as Candidates for Monitoring of Pathology

  2022 Molecular Neurobiology article Neuroscience Genetic Neurodegenerative Diseases Open access

  3

  citations
• The human hepatocyte TXG-MAPr: gene co-expression network modules to support mechanism-based risk assessment

  2021 Archives of Toxicology article Pharmacology, Toxicology and Pharmaceutics Drug-Induced Hepatotoxicity and Protection Open access

  43

  citations
• The human hepatocyte TXG-MAPr: WGCNA transcriptomic modules to support mechanism-based risk assessment

  2021 bioRxiv (Cold Spring Harbor Laboratory) preprint Pharmacology, Toxicology and Pharmaceutics Drug-Induced Hepatotoxicity and Protection Open access

  1

  citations
• Whole blood co-expression modules associate with metabolic traits and type 2 diabetes: an IMI-DIRECT study

  2020 Genome Medicine article Medicine Adipokines, Inflammation, and Metabolic Diseases Open access

  14

  citations

11 results