An ontology for cell types

• From slides to AI-ready maps: Standardized multi-layer tissue maps as metadata for artificial intelligence in digital pathology

  2026 Artificial Intelligence in Medicine article Computer Science AI in cancer detection Open access

  3

  citations
• Vision, challenges and opportunities for a Plant Cell Atlas

  2021 eLife article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access

  76

  citations
• A machine learning method for the discovery of minimum marker gene combinations for cell type identification from single-cell RNA sequencing

  2021 Genome Research preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access

  96

  citations
• NS-Forest: A machine learning method for the objective identification of minimum marker gene combinations for cell type determination from single cell RNA sequencing

  2020 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access

  12

  citations
• A community-based transcriptomics classification and nomenclature of neocortical cell types

  2020 Nature Neuroscience article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access

  30

  citations
• The Minimum Information about a Molecular Interaction CAusal STatement (MI2CAST)

  2020 Bioinformatics article Biochemistry, Genetics and Molecular Biology Bioinformatics and Genomic Networks Open access

  23

  citations

6 results