Papers matching “transcriptional programs” 41
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Distinct transcriptional programs define human IgG4 + memory B cells2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Immunology and Microbiology T-cell and B-cell Immunology Open access
Laurent M. Paardekooper, Jessica M van Bokkum, Yvonne E. Fillié‐Grijpma, Dana L.E. Vergoossen, Isabel Benner, Theresa Kissel, +5 more
0citations -
Spatial patterning of transcriptional and regulatory programs in the primate subcortex2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Shu Dan, Meghan A. Turner, Michael DeBerardine, Lakme Caceres, Victor E. Nieto-Caballero, Jessica Schembri, +28 more
2citations -
Polyploid cardiomyocytes define disease-specific transcriptional states in the mammalian heart2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Congenital heart defects research Open access
Paul Kießling, Mehdi Joodaki, Daryna Pikulska, Emilia Scheidereit, Giulia Cesaro, Mayra Ruiz, +52 more
5citations -
Orphan nuclear receptors Err2 and 3 promote a feature-specific terminal differentiation program underlying gamma motor neuron function and proprioceptive movement control2022 bioRxiv (Cold Spring Harbor Laboratory) preprint Neuroscience Nuclear Receptors and Signaling Open access
Mudassar N. Khan, Pitchaiah Cherukuri, Francesco Negro, Piotr Fabrowski, Camille Lancelin, Tsung-I Lee, +7 more
0citations -
DUX4 induces a homogeneous sequence of molecular changes, culminating in the activation of a stem-cell-like transcriptional network and induction of apoptosis in somatic cells1citations
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Transcriptional response to host chemical cues underpins expansion of host range in a fungal plant pathogen lineage2020 bioRxiv (Cold Spring Harbor Laboratory) preprint Agricultural and Biological Sciences Plant pathogens and resistance mechanisms Open access
Stefan Kusch, Justine Larrouy, Heba M. M. Ibrahim, Noémie Gasset, Olivier Navaud, Malick Mbengué, +4 more
1citations -
Acquisition of hypoxia inducibility by oxygen sensing N-terminal cysteine oxidase in spermatophytes2020 bioRxiv (Cold Spring Harbor Laboratory) preprint Agricultural and Biological Sciences Plant responses to water stress Open access
Daan A. Weits, Lina Zhou, Beatrice Giuntoli, Laura Dalle Carbonare, Sergio Iacopino, Luca Piccinini, +5 more
4citations -
The plant longevity gene AHL15 delays leaf senescence by repressing ORESARA1 and cytokinin degradation2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Plant Gene Expression Analysis Open access
Thalia Luden, Petra Amakorová, Ondřej Novák, Salma Balazadeh, Remko Offringa
1citations -
Spatiotemporal heterogeneity of glioblastoma is dictated by microenvironmental interference2021 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine Glioma Diagnosis and Treatment Open access
Vidhya Madapusi Ravi, Paulina Will, Jan Kueckelhaus, Na Sun, Kevin Joseph, Henrike Salié, +20 more
12citations -
Loss of ABCA4 from photoreceptor discs triggers changes in glial cell homeostasis2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Retinal Development and Disorders Open access
Rossella Valenzano, Andrew J. McDonald, Carmen Gallego, Charlotte A. Andriessen, Ioannis Moustakas, Aat A. Mulder, +4 more
0citations -
Same-section spatial metabolo-transcriptomics using Stereo-meta-seq reveals DHA-driven kidney maturation2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Roan H van Scheppingen, Baihua Wu, Yumeng Zhang, Sytske Schep, Ulli Winter, Yilong Zou, +9 more
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Synthetic Maturation of Multilineage Human Liver Organoids via Genetically Guided Engineering2020 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Pluripotent Stem Cells Research Open access cited by 1 patent
Jeremy J. Velazquez, Ryan LeGraw, Farzaneh Moghadam, Yuqi Tan, Jacquelyn A. Kilbourne, Joshua Hislop, +7 more
4citations -
Efficient generation of lower induced Motor Neurons by coupling Ngn2 expression with developmental cues2022 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Pluripotent Stem Cells Research Open access
Francesco Limone, Jana M. Mitchell, Irune Guerra San Juan, Janell L.M. Smith, Kavya Raghunathan, Sulagna Dia Ghosh, +8 more
6citations -
Facioscapulohumeral Dystrophy: Molecular Basis and Therapeutic Opportunities2024 Cold Spring Harbor Perspectives in Biology preprint Biochemistry, Genetics and Molecular Biology Muscle Physiology and Disorders Open access
Tessa Arends, Danielle C. Hamm, Silvère M. van der Maarel, Stephen J. Tapscott
9citations -
EOMES and IL-10 regulate anti-tumor activity of PD-1 + CD4 + T-cells in B-cell Non-Hodgkin lymphoma2020 bioRxiv (Cold Spring Harbor Laboratory) preprint Immunology and Microbiology T-cell and B-cell Immunology Open access
Philipp M. Roessner, Laura Llaó Cid, Ekaterina Lupar, Tobias Roider, Marie Bordas, Christoph Schifflers, +10 more
4citations -
TCA cycle rewiring underpins implantation and histone acetylation programming2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Pluripotent Stem Cells Research Open access
Eleni Kafkia, David Pladevall‐Morera, Lidia Argemi‐Muntadas, Gangqi Wang, Roberta Noberini, Sandra Bagés‐Arnal, +6 more
2citations -
Epigenetic priming of embryonic enhancer elements coordinates developmental gene networks2024 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Genomics and Chromatin Dynamics Open access
Christopher D Todd, Jannat Ijaz, Fereshteh Torabi, Oleksandr Dovgusha, Olivia Cracknell, Tim Lohoff, +9 more
1citations -
The cell cycle regulator Cyclin E1 drives macrophage-associated inflammatory responses in acute immune-mediated hepatitis2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine Liver physiology and pathology Open access
Christian Penners, Cheng Lin, Alexander Jans, Antje Mohs, Frank Tacke, Matthias Bartneck, +2 more
0citations -
Lrif1 modulates Trim28-mediated repression of the Dux locus in mouse embryonic stem cells2024 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Genomics and Chromatin Dynamics Open access
Darina Šikrová, Román González‐Prieto, Alfred C.O. Vertegaal, Judit Balog, Lucia Daxinger, Silvère M. van der Maarel
0citations -
Methylation-Guided Stratification of Colorectal Cancer Reveals Immune Subtypes with Distinct Clinical Outcomes2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Epigenetics and DNA Methylation
Eiman I. Ahmed, Raghvendra Mall, Christophe Michel Raynaud, Heba Saadeh, Shimaa Sherif, Rania Alanany, +4 more
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Adeno-associated virus (AAV)-TBX18 does not generate biological pacemaker activity, unlike AAV-Hcn22025 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine Cardiac electrophysiology and arrhythmias Open access
Jianan Wang, Mathilde R. Rivaud, Mischa Klerk, Arnie Boender, Ruud N. Visser, Rinske Sparrius, +13 more
0citations