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Fluoroquinolone-Triggered Prophage Induction in Streptococcus anginosus Reveals Lytic Cycle, CRISPR–Prophage Interplay, and the potential for Cross-Species Horizontal Gene Transfer2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Environmental Science Bacteriophages and microbial interactions Open access
Dorina Haider, Salome Barbakadze, Julia P. Mosler, Stefanie Mauerer, Clarissa Read, Parham Sendi, +2 more
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Major human schistosome species express different glycans with immunological and diagnostic implications.2025 Research Square preprint Immunology and Microbiology Parasites and Host Interactions Open access
Cornelis Hendrik Hokke, Laudine M. C. Petralia, Angela van Diepen, Tao Zhang, Anna O. Kildemoes, Tom Veldhuizen, +5 more
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Parallel genetic adaptation of Bacillus subtilis to different plant species2023 bioRxiv (Cold Spring Harbor Laboratory) preprint Agricultural and Biological Sciences Plant-Microbe Interactions and Immunity Open access
Guohai Hu, Yue Wang, Christopher Blake, Mathilde Nordgaard, Xin Liu, Bo Wang, +1 more
2citations -
Phenological turnover matters when making trait-based predictions of plant-pollinator interactions2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Agricultural and Biological Sciences Plant and animal studies Open access
Aoife Cantwell‐Jones, Juliet Everson, Olivia K. Bates, Abdullah M. R. Al‐Hayali, George Henry Allen, Frauke Celiebe, +11 more
1citations -
Genome sequence and characterization of Streptomyces phage Pablito, representing a new species within the genus Janusvirus2022 Research Square preprint Environmental Science Bacteriophages and microbial interactions Open access
Véronique Ongenae, Joana Azeredo, Andrew M. Kropinski, Daniel E. Rozen, Ariane Briegel, Dennis Claessen
2citations -
Genome sequence and characterization of Streptomyces phages Vanseggelen and Verabelle, representing two new species within the genus Camvirus2023 Research Square preprint Environmental Science Bacteriophages and microbial interactions Open access
Véronique Ongenae, Annabel Kempff, Vera van Neer, Helena Shomar, Florian Tesson, Daniel E. Rozen, +2 more
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Reciprocal interactions between the sorghum root microbiome and the parasitic weed Striga hermonthica2023 bioRxiv (Cold Spring Harbor Laboratory) preprint Agricultural and Biological Sciences Plant Parasitism and Resistance Open access
Desalegn W. Etalo, Dominika Rybka, Lorenzo Lombard, Márcio Fernandes Alves Leite, Adam Ossowicki, Francisco Dini‐Andreote, +5 more
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High-throughput profiling of drug interactions in Gram-positive bacteria2022 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine Antimicrobial Resistance in Staphylococcus Open access
Elisabetta Cacace, Vladislav Kim, Michael R. Knopp, Manuela Tietgen, Amber Brauer-Nikonow, Kemal İnecik, +13 more
2citations -
A novel sialic acid-binding adhesin present in multiple species contributes to the pathogenesis of Infective endocarditis2020 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine Infective Endocarditis Diagnosis and Management Open access
Meztlli O. Gaytán, Anirudh K. Singh, Shireen A. Woodiga, Surina A. Patel, Seon‐Sook An, Arturo Vera‐Ponce de León, +8 more
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Strain-specific higher-order interactions break phylogenetic conservatism in microbial communities2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Environmental Science Microbial Community Ecology and Physiology Open access
Emmanuel Cordero-Martínez, Marisol Navarro-Miranda, Obed Ramírez‐Sánchez, Edder D. Bustos‐Díaz, Victor M. Higareda‐Alvear, Gabriel Moreno‐Hagelsieb, +3 more
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Experimental and computational analyses of KEA3-dependent photosynthetic responses uncover species-specific molecular variation2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Photosynthetic Processes and Mechanisms Open access
Thekla von Bismarck, Quang Huy Nguyen, Jeremy Ruß, Linnéa Strandberg, Moritz Krämer, Julia Damen, +5 more
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Severe acute respiratory syndrome-related coronavirus : The species and its viruses – a statement of the Coronavirus Study Group2020 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine SARS-CoV-2 and COVID-19 Research Open access
Alexander E. Gorbalenya, Susan C. Baker, Ralph Steven Baric, Raoul J. de Groot, Christian Drosten, Anastasia A. Gulyaeva, +11 more
1,408citations -
Simulations of the infant gut microbiota suggest that complex ecological interactions regulate effects of human milk oligosaccharides on microbial mucin consumption2024 bioRxiv (Cold Spring Harbor Laboratory) preprint Nursing Infant Nutrition and Health Open access
David M. Versluis, Clair Wijtkamp, Ellen Looijesteijn, Jan M.W. Geurts, Roeland M. H. Merks
2citations -
Functional traits drive speciation in tropical palms through complex interactions between genome size, adaptation and allometry2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Agricultural and Biological Sciences Plant Diversity and Evolution
Sreetama Bhadra, Ilia J. Leitch, Sidonie Bellot, William J. Baker, Renske E. Onstein
2citations -
Disentangling the potential factors defining Bacillus subtilis abundance in natural soils2024 bioRxiv (Cold Spring Harbor Laboratory) preprint Agricultural and Biological Sciences Plant-Microbe Interactions and Immunity Open access
Xinming Xu, Adele Pioppi, Heiko T. Kiesewalter, Mikael Lenz Strube, Ákos T. Kovács
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Assessing the Role of the Graphene Family Nanomaterials (Gfns: Graphene, Go, Rgo) in Modifying the Toxicity Potential and Environmental Risk of Fire Retardant, Tetrabromobisphenol-A (Tbbpa) in the Marine Microalgae Chlorella Sp2024 SSRN Electronic Journal preprint Environmental Science Environmental Toxicology and Ecotoxicology Open access
Abhrajit Debroy, M. Joyce Nirmala, Mrudula Pulimi, Willie J.G.M. Peijnenburg, Amitava Mukherjee
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Entropy of Jacobian ensembles measures the robustness of ecological community dynamics to perturbations2026 Research Square preprint Medicine Mathematical and Theoretical Epidemiology and Ecology Models Open access
Giulio Virginio Clemente, Tancredi Caruso, Diego Garlaschelli, Giovanni Strona
0citations