Papers matching “spatial organization of immune cells” 15
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Associations between spatial distribution of immune cell subsets and clinical outcomes in patients with advanced melanoma treated with immune checkpoint inhibitors: results from the PUMA challenge
Mark Schuiveling, Hong Liu, Daniel Eek, Martina Hanusová, Isabella A.J. van Duin, Laurens S. ter Maat, +30 more
0citations -
Single-Cell Integration and Multi-Modal Profiling Reveals Phenotypes and Spatial Organization of Neutrophils in Colorectal Cancer2025 SSRN Electronic Journal preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Valentin Marteau, Niloofar Nemati, Kristina Handler, Deeksha Raju, Alexander Kirchmair, Dietmar Rieder, +37 more
0citations -
Immunogenomic, single-cell and spatial dissection of CD8 + T cell exhaustion reveals critical determinants of cancer immunotherapy2021 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine Cancer Immunotherapy and Biomarkers Open access
Stefan Naulaerts, Daniel Borràs, Asier Antoranz, Julie Messiaen, Yannick Van Herck, Lendert Gelens, +15 more
7citations -
Lrig1 and Wnt dependent niches dictate segregation of resident immune cells and melanocytes in murine tail epidermis2021 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology melanin and skin pigmentation Open access
Susanne C. Baess, Ann-Kathrin Burkhart, Sabrina Cappello, Annika Graband, Kristin Seré, Martin Zenke, +2 more
0citations -
The landscape of tertiary lymphoid structures in endometrial cancer revealed through harmonized multi-level transcriptomics2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine Cancer Immunotherapy and Biomarkers Open access
Marta Requesens, Koen Brummel, Arkajyoti Bhattacharya, Feija Somefun, Nienke van Rooij, Annechien Plat, +10 more
0citations -
A multicenter spatial transcriptomics atlas of human tuberculosis and non-tuberculous mycobacterial disease2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine Tuberculosis Research and Epidemiology Open access
Xun Jiang, Leonard Christian, Liang Zhou, Nienke van Unen, Lavinia Neubert, Jan C. Kamp, +13 more
2citations -
Single-cell and spatial transcriptomics resolve airway obliteration in bronchiolitis obliterans syndrome2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine Transplantation: Methods and Outcomes Open access
Jannik Ruwisch, Hande Yilmaz, Leonard Christian, Lavinia Neubert, Lena Maureen Leiber, Annalea Brüggemann, +29 more
0citations -
A machine learning method for the discovery of minimum marker gene combinations for cell type identification from single-cell RNA sequencing2021 Genome Research preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Brian D. Aevermann, Yun Zhang, Mark A. Novotny, Mohamed Keshk, Trygve E. Bakken, Jeremy A. Miller, +4 more
96citations -
NS-Forest: A machine learning method for the objective identification of minimum marker gene combinations for cell type determination from single cell RNA sequencing2020 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Brian D. Aevermann, Yun Zhang, Mark A. Novotny, Trygve E. Bakken, Jeremy A. Miller, Rebecca D. Hodge, +3 more
12citations -
Nerve fibers in the Tumor Microenvironment are co-localized with Tertiary Lymphoid Structures2020 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine Pancreatic and Hepatic Oncology Research Open access
Lara Rosaline Heij, Xiuxiang Tan, Jakob Nikolas Kather, Jan Niehues, Shivan Sivakumar, Nicole Maria Heussen, +12 more
0citations -
Developmental factors drive the compartmentalised and discontinuous maturation of the small intestinal epithelium during the early postnatal period2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Digestive system and related health Open access
Aline Dupont, Stefan Schlößer, Matthias A. Schmitz, Isabel Richter, Narasimha Murthy Keshava Prasad Gubbi, Mingbo Cheng, +9 more
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Microbial Invasion and Immunosuppression Drives Adenoma Progression in Early Colorectal Cancer Development2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Gut microbiota and health Open access
Wei Liang, Lisa Falk, Daniele Lucarelli, Philipp Putze, Amira Metwaly, Yiran Zheng, +13 more
0citations -
CMAS dampens anti-tumor immunity and associates with response to neoadjuvant immunotherapy in melanoma2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine Cancer Immunotherapy and Biomarkers Open access
Magalí B. Coccimiglio, Sofia Ibáñez‐Molero, Babet O. Springer, Laura J. W. Kruijssen, Georgia Clayton, Reece Davison, +17 more
0citations
15 results