Papers matching “spatial organization of immune cells” 58
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35 Chemokine-driven spatial organization of immune cell microaggregates marks oropharyngeal squamous cell carcinomas containing tumor-specific T cells2021 Regular and Young Investigator Award Abstracts conference-abstract Medicine Cancer Immunotherapy and Biomarkers Open access
Ziena Abdulrahman, Saskia J A M Santegoets, Gregor Sturm, Pornpimol Charoentong, Marieke E. Ijsselsteijn, Antonios Somarakis, +8 more
0citations -
Tumor-specific T cells support chemokine-driven spatial organization of intratumoral immune microaggregates needed for long survival2022 Journal for ImmunoTherapy of Cancer article Medicine Cancer Immunotherapy and Biomarkers Open access cited by 1 patent
Ziena Abdulrahman, Saskia J A M Santegoets, Gregor Sturm, Pornpimol Charoentong, Marieke E. Ijsselsteijn, Antonios Somarakis, +8 more
39citations -
Associations between spatial distribution of immune cell subsets and clinical outcomes in patients with advanced melanoma treated with immune checkpoint inhibitors: results from the PUMA challenge
Mark Schuiveling, Hong Liu, Daniel Eek, Martina Hanusová, Isabella A.J. van Duin, Laurens S. ter Maat, +30 more
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Associations between spatial distribution of immune cell subsets and clinical outcomes in patients with advanced melanoma treated with immune checkpoint inhibitors: results from the PUMA challenge
Mark Schuiveling, Hong Liu, Daniel Eek, Martina Hanusová, Isabella A.J. van Duin, Laurens S. ter Maat, +32 more
0citations -
Single-Cell Integration and Multi-Modal Profiling Reveals Phenotypes and Spatial Organization of Neutrophils in Colorectal Cancer2025 SSRN Electronic Journal preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Valentin Marteau, Niloofar Nemati, Kristina Handler, Deeksha Raju, Alexander Kirchmair, Dietmar Rieder, +37 more
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Single-cell integration and multi-modal profiling reveals phenotypes and spatial organization of neutrophils in colorectal cancer2026 Cancer Cell article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Valentin Marteau, Niloofar Nemati, Kristina Handler, Deeksha Raju, Alexander Kirchmair, Dietmar Rieder, +40 more
34citations -
Cellular interaction of mycosis fungoides tumor cells changes from cytotoxic CD8+ T cells in plaques to B cells in tumors2026 Frontiers in Immunology article Medicine Cutaneous lymphoproliferative disorders research Open access
Veerle A. Merkus, Marieke E. Ijsselsteijn, Marie S.N. Chevalier Florquin, Sanne de Haan, Vincent van Unen, Cornelis P. Tensen, +6 more
0citations -
962 Single-cell spatial in situ transcriptomics unravels vulvar HSIL composition associated with complete response to therapeutic vaccination2023 Regular and Young Investigator Award Abstracts conference-abstract Medicine Cervical Cancer and HPV Research Open access
Ziena Abdulrahman, Mariëtte I.E. van Poelgeest, Marij J.P. Welters, Sjoerd van der Burg
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Immunogenomic, single-cell and spatial dissection of CD8 + T cell exhaustion reveals critical determinants of cancer immunotherapy2021 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine Cancer Immunotherapy and Biomarkers Open access
Stefan Naulaerts, Daniel Borràs, Asier Antoranz, Julie Messiaen, Yannick Van Herck, Lendert Gelens, +15 more
7citations -
1381 Deciphering the role of immune cell communities in the initiation and progression of human colorectal cancer2024 Regular and Young Investigator Award Abstracts conference-abstract Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
S. Engels, Ana Marta Sequeira, Marieke E. Ijsselsteijn, Benedetta Manzato, Hao Dang, Jurjen J. Boonstra, +5 more
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Single-cell spatial transcriptomics unravels cell states and ecosystems associated with clinical response to immunotherapy2025 Journal for ImmunoTherapy of Cancer article Medicine Cancer Immunotherapy and Biomarkers Open access
Ziena Abdulrahman, Roderick C. Slieker, Daniel McGuire, Marij J.P. Welters, Mariëtte I.E. van Poelgeest, Sjoerd H. van der Burg
23citations -
Detection of cell markers from single cell RNA-seq with sc2marker2021 Zenodo (CERN European Organization for Nuclear Research) article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Ronghui Li, Bella Benjamin, Rebekka K. Schneider, Ivan G. Costa
0citations -
Detection of cell markers from single cell RNA-seq with sc2marker2021 Zenodo (CERN European Organization for Nuclear Research) article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Ronghui Li, Bella Benjamin, Rebekka K. Schneider, Ivan G. Costa
0citations -
Detection of cell markers from single cell RNA-seq with sc2marker2021 Zenodo (CERN European Organization for Nuclear Research) article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Ronghui Li, Bella Benjamin, Rebekka K. Schneider, Ivan G. Costa
0citations -
Detection of cell markers from single cell RNA-seq with sc2marker2021 Zenodo (CERN European Organization for Nuclear Research) article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Ronghui Li, Bella Benjamin, Rebekka K. Schneider, Ivan G. Costa
0citations -
Detection of cell markers from single cell RNA-seq with sc2marker2021 Zenodo (CERN European Organization for Nuclear Research) article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Ronghui Li, Bella Benjamin, Rebekka K. Schneider, Ivan G. Costa
0citations