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scE(match): Privacy-Preserving Cluster Matching of Single-Cell Data2024 IEEE International Conference on Trust, Security and Privacy in Computing and Communications (TrustCom) conference-paper Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics
Johannes Lohmöller, Jannis Scheiber, Rafael Kramann, Klaus Wehrle, Sikander Hayat, Jan Pennekamp
2citations -
Cytosplore EvoViewer: Visual Analytics of Conserved Evolutionary Patterns in multi-species single-cell sequencing data2025 IEEE Pacific Visualization Conference (PacificVis) conference-paper Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics
Soumyadeep Basu, Morgan E. Wirthlin, Jeroen Eggermont, Thomas Kroes, Boudewijn P. F. Lelieveldt, Ed S. Lein, +2 more
0citations -
Combining Knowledge About Metabolic Networks and Single-Cell Data with Maximum Entropy2025 conference-paper Biochemistry, Genetics and Molecular Biology Microbial Metabolic Engineering and Bioproduction Open access
Carola Sophia Heinzel, Johann F. Jadebeck, Elisabeth Zelle, Johannes Seiffarth, Katharina Nöh
0citations -
Tracking One-in-a-Million: Large-Scale Benchmark for Microbial Single-Cell Tracking with Experiment-Aware Robustness Metrics2025 Lecture notes in computer science conference-paper Biochemistry, Genetics and Molecular Biology Cell Image Analysis Techniques Open access
Johannes Seiffarth, Luisa Blöbaum, Richard Dominik Paul, Nils Friederich, Angelo Jovin Yamachui Sitcheu, Ralf Mikut, +3 more
3citations -
Batch-effect correction improves downstream imaging mass cytometry data quality and facilitates robust cell type identification in the liver and hepatocellular carcinoma microenvironment2025 Zeitschrift für Gastroenterologie conference-paper Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics
Henrike Salié, Ana Marta Sequeira, Marieke E. Ijsselsteijn, Felix Röttele, Yuan Suo, Lara Wischer, +4 more
0citations -
FAIR GraphRAG: A Retrieval-Augmented Generation Approach for Semantic Data Analysis2025 IEEE International Conference on Knowledge Graph (ICKG) conference-paper Computer Science Research Data Management Practices Open access
Marlena Flüh, Soo-Yon Kim, Carolin Victoria Schneider, Sandra Geisler
1citations -
EAP4EMSIG - Experiment Automation Pipeline for Event-Driven Microscopy to Smart Microfluidic Single-Cells Analysis2024 conference-paper Biochemistry, Genetics and Molecular Biology Cell Image Analysis Techniques Open access
Nils Friederich, Angelo Jovin Yamachui Sitcheu, Annika Nassal, Matthias Pesch, Erenus Yildiz, Maximilian Beichter, +9 more
1citations -
Decentralized Motion Inference and Registration of Neuropixel Data2021 IEEE International Conference on Acoustics Speech and Signal Processing conference-paper Neuroscience Neuroscience and Neural Engineering
Erdem Varol, Julien Boussard, Nishchal Dethe, Olivier Winter, Anne E Urai, International Brain Laboratory, +2 more
20citations
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