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Single cell ATAC-seq Mouse Kidney Data: Chromatin-accessibility estimation from single-cell ATAC data with scOpen2021 Zenodo (CERN European Organization for Nuclear Research) dataset Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Zhijian Li, Christoph Kuppe, Susanne Maria Ziegler, Mingbo Cheng, Nazanin Kabgani, Sylvia Menzel, +3 more
0citations -
Single cell ATAC-seq Mouse Kidney Data: Chromatin-accessibility estimation from single-cell ATAC data with scOpen2021 Zenodo (CERN European Organization for Nuclear Research) dataset Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Zhijian Li, Christoph Kuppe, Susanne Maria Ziegler, Mingbo Cheng, Nazanin Kabgani, Sylvia Menzel, +3 more
0citations -
Chromatin-accessibility estimation from single-cell ATAC-seq data with scOpen2021 Nature Communications article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Zhijian Li, Christoph Kuppe, Susanne Maria Ziegler, Mingbo Cheng, Nazanin Kabgani, Sylvia Menzel, +3 more
141citations -
Resolving Temporally Ambiguous Relationships between Single-Nucleus Multimodal Sequencing Derived Cell Populations2025 SSRN Electronic Journal preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Rick Mulders, Mathew Nickel Maunu, Rodrigo Coutinho de Almeida, Marcella van Hoolwerff, H. Eka D. Suchiman, Yavuz Ariyürek, +3 more
0citations -
Decoding myofibroblast origins in human kidney fibrosis2020 Edinburgh Research Explorer (University of Edinburgh) dataset Medicine Chronic Kidney Disease and Diabetes Open access
Christoph Kuppe, Mahmoud M. Ibrahim, Jennifer Kranz, Xiaoting Zhang, Susanne Maria Ziegler, Jitske Jansen, +23 more
2citations -
Decoding myofibroblast origins in human kidney fibrosis2020 Zenodo (CERN European Organization for Nuclear Research) dataset Medicine Chronic Kidney Disease and Diabetes Open access
Christoph Kuppe, Mahmoud M. Ibrahim, Jennifer Kranz, Xiaoting Zhang, Susanne Maria Ziegler, Jitske Jansen, +23 more
0citations -
Mapping the Molecular Atlas of Podocyte Response to Glucocorticoids Using Multi-Omics Analyses2023 Journal of the American Society of Nephrology conference-abstract Medicine Renal Diseases and Glomerulopathies
Martijn van den Broek, Bartholomeus T. van den Berge, Michiel F. Schreuder, Bart Smeets, Jitske Jansen
0citations -
The EHA Research Roadmap: Hematopoietic Stem Cells and Allotransplantation.2022 Apollo (University of Cambridge) other Medicine Hematopoietic Stem Cell Transplantation Open access
Willem E. Fibbe, Rosa Bernardi, Pierre Charbord, Daniela S. Krause, Cristina Lo Celso, Simón Méndez‐Ferrer, +6 more
1citations -
Transcriptional activation of Jun and Fos members of the AP‐1 complex is a conserved signature of immune aging that contributes to inflammaging2023 Aging Cell article Biochemistry, Genetics and Molecular Biology Genetics, Aging, and Longevity in Model Organisms Open access
Emin Onur Karakaslar, Neerja Katiyar, Muneer G. Hasham, Ahrim Youn, Siddhartha Sharma, Cheng‐Han Chung, +4 more
98citations -
Transcriptional activation of Jun and Fos members of the AP-1 complex is a conserved signature of immune aging that contributes to inflammaging2022 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Genetics, Aging, and Longevity in Model Organisms Open access
Emin Onur Karakaslar, Neerja Katiyar, Muneer G. Hasham, Ahrim Youn, Siddhartha M. Sharma, Cheng‐Han Chung, +4 more
6citations -
The pioneer factor, ETV2, regulates networks to specify the embryonic endothelial lineage2025 Cardiovascular Research article Biochemistry, Genetics and Molecular Biology Developmental Biology and Gene Regulation Open access
Satyabrata Das, Xiao Ma, Kidus Hailemariam, Javier E. Sierra-Pagán, Thijs A Larson, Young Geun Choi, +7 more
4citations
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