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Time to run: Late rather than early exercise training in mice remodels the gut microbiome and reduces atherosclerosis development2022 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Gut microbiota and health Open access
Milena Schönke, Zhixiong Ying, Artemiy Kovynev, Wietse In het Panhuis, Anne Binnendijk, Sabine van der Poel, +5 more
3citations -
Development and validation of an experimental life support system to study the impact of ultraviolet B radiation and temperature on coral reef microbial communities2023 bioRxiv (Cold Spring Harbor Laboratory) preprint Environmental Science Coral and Marine Ecosystems Studies Open access
T.M. Stuij, Daniel F. R. Cleary, Rui J. M. Rocha, Ana R. M. Polónia, Davide Silva, Jörg C. Frommlet, +5 more
2citations -
Function-Based Selection of Synthetic Communities Enables Mechanistic Microbiome Studies2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Gut microbiota and health Open access
Thomas C. A. Hitch, Silvia Bolsega, Charlotte Deschamps, Lucie Etienne‐Mesmin, Nicole Simone Treichel, Stéphanie Blanquet‐Diot, +3 more
1citations -
Microbiome engineering optimized Antarctic microbiota to support a plant host under water deficit2022 Research Square preprint Agricultural and Biological Sciences Plant-Microbe Interactions and Immunity Open access
Rodrigo Rodríguez, Patricio Javier Barra, Giovanni Larama, Víctor J. Carrión, Marı́a de la Luz Mora, Hale Lauren, +1 more
0citations -
Development of a GC-MS/MS method to quantify 120 gut microbiota-derived metabolites2025 ChemRxiv preprint Biochemistry, Genetics and Molecular Biology Gut microbiota and health Open access
Nikita Denisov, Amber Brauer-Nikonow, George Maftei, Georg Zeller, Denise Medeiros Selegato, Michael Bruce Zimmermann
1citations -
Comparative metabolomics and microbiome analysis of Ethanol vs. OMNImet/gene®•GUT fecal stabilization2023 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Gut microbiota and health Open access
Heidi Isokääntä, Lucas Pinto da Silva, Naama Karu, Teemu Kallonen, Anna‐Katariina Aatsinki, Thomas Hankemeier, +9 more
2citations -
Asymptomatic gut colonization by extended-spectrum beta-lactamase-producing Escherichia coli is not associated with an altered gut microbiome or metabolome in Dutch adults2021 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Gut microbiota and health Open access
Quinten R. Ducarmon, Romy Daniëlle Zwittink, Roel P J Willems, Aswin Verhoeven, Sam Nooij, Fiona R.M. van der Klis, +6 more
1citations -
Impacts of dietary exposure to pesticides on faecal microbiome metabolism in adult twins2021 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Gut microbiota and health Open access
Robin Mesnage, Ruth C. E. Bowyer, Souleiman El Balkhi, Franck Saint‐Marcoux, Arnaud Gardere, Quinten R. Ducarmon, +8 more
3citations -
Prokaryotic communities of the French Polynesian sponge Dactylospongia metachromia display a site-specific and stable diversity during an aquaculture trial2024 Research Square preprint Biochemistry, Genetics and Molecular Biology Marine Sponges and Natural Products Open access
Mathilde Maslin, Benoît Paix, Niels van der Windt, Rohani Ambo‐Rappe, Cécile Debitus, Nabila Gaertner‐Mazouni, +2 more
0citations -
Predicting Rhizosphere Competence Related Catabolic Gene Clusters in plant-associated bacteria with RhizoSMASH2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Agricultural and Biological Sciences Plant-Microbe Interactions and Immunity Open access
Yuze Li, Mingxue Sun, Jos M. Raaijmakers, Liesje Mommer, Fusuo S. Zhang, Chunxu Song, +1 more
2citations -
Lineage-specific microbial protein prediction enables large-scale exploration of protein ecology within the human gut2024 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Genomics and Phylogenetic Studies Open access
Matthias A. Schmitz, Nicholas J Dimonaco, Thomas Clavel, Thomas C. A. Hitch
1citations -
Authors’ reply re: Universal screening versus risk-based protocols for antibiotic prophylaxis during childbirth to prevent early-onset Group B streptococcal disease: A systematic review and meta-analysis. (Response to BJOG-20-0383)
Geke Hasperhoven, Salwan Al‐Nasiry, Vincent Bekker, Eduardo Villamor, Boris W. Kramer
0citations -
ICP1 bacteriophage treatment antagonizes colonization of the zebrafish larval intestine by Vibrio cholerae2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Environmental Science Bacteriophages and microbial interactions Open access
Adam Sidi Mabrouk, Jamie S. Depelteau, Chiara Foini, Susanne Brenzinger, Ronald W.A.L. Limpens, Manuel Majrouh, +2 more
2citations -
A toolkit for transposon libraries and functional genomics in intestinal Bacteroidales2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Bacterial Genetics and Biotechnology Open access
Carlos Geert Pieter Voogdt, Indra Roux, Nicolai Karcher, Afonso Martins Bravo, Lajos Kalmár, Vallo Varik, +5 more
5citations -
2’-Fucosyllactose helps butyrate producers outgrow competitors in infant gut microbiota simulations2023 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Gut microbiota and health Open access
David M. Versluis, Ruud Schoemaker, Ellen Looijesteijn, Jan M.W. Geurts, Roeland M. H. Merks
0citations -
Distinct Intestinal Microbial Signatures Linked to Accelerated Biological Aging in People with HIV2023 Research Square preprint Biochemistry, Genetics and Molecular Biology Gut microbiota and health Open access
Shalini Thakur Singh, Leila B. Giron, Maliha W. Shaikh, Shivanjali Shankaran, Phillip A. Engen, Aaron R. Goldman, +13 more
5citations -
Secondary bile acid production by gut bacteria promotes Western diet-associated colorectal cancer2023 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Gut microbiota and health Open access
Esther Wortmann, Annika Oßwald, David Wylensek, Stephanie Kuhls, Olivia I. Coleman, Quinten R. Ducarmon, +17 more
4citations -
TMAO and its precursors in relation to host genetics, gut microbial composition, diet, and clinical outcomes: Meta-analysis of 5 prospective population-based cohorts2022 medRxiv preprint Biochemistry, Genetics and Molecular Biology Gut microbiota and health Open access
Sergio Andreu‐Sánchez, Shahzad Ahmad, Alexander Kurilshikov, Marian Beekman, Mohsen Ghanbari, Martijn H. J. R. van Faassen, +17 more
2citations -
A cell-free expression system using a novel bacteriophage RNA polymerase for metagenome screening2022 Research Square preprint Biochemistry, Genetics and Molecular Biology Genomics and Phylogenetic Studies Open access
Yuchen Han, Birhanu M. Kinfu, Fabian Blombach, Gwenny Cackett, Hongli Zhang, Pablo Pérez-García, +7 more
0citations
25 results