Papers matching “microbial growth modeling” 14
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Growth-coupled microbial biosynthesis of the animal pigment xanthommatin2024 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Microbial Metabolic Engineering and Bioproduction Open access
Leah B. Bushin, Tobias B. Alter, Maria V G Alván-Vargas, Lara Dürr, Elina C. Olson, Mariah J. Avila, +5 more
0citations -
Bayesian calibration, process modeling and uncertainty quantification in biotechnology2021 bioRxiv (Cold Spring Harbor Laboratory) preprint Computer Science Gaussian Processes and Bayesian Inference Open access
Laura M. Helleckes, Michael Osthege, Wolfgang Wiechert, Eric von Lieres, Marco Oldiges
4citations -
A multiscale spatiotemporal model including a switch from aerobic to anaerobic metabolism reproduces succession in the early infant gut microbiota2021 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Gut microbiota and health Open access
David M. Versluis, Ruud Schoemaker, Ellen Looijesteijn, Daniël Muysken, Prescilla V. Jeurink, Marcel Paques, +2 more
2citations -
Distinct colorectal cancer genotypes shape microbial ecosystems and reveal stage-specific microbiota dependencies2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Gut microbiota and health Open access
Valentina Brunner, Nicholas Bodenstein, Antonio Enrico Zaurito, M Silva, Frederic Saab, Fabian Springer, +18 more
0citations -
Genomic and metabolic plasticity drive alternative scenarios for adapting Pseudomonas putida to non-native substrate D-xylose2023 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Microbial Metabolic Engineering and Bioproduction Open access
Pavel Dvořák, Barbora Burýšková, Barbora Popelářová, Birgitta E. Ebert, Tibor Botka, Dalimil Bujdoš, +6 more
0citations -
Siderophores can alter the population dynamics of fungal-bacterial communities by inhibiting specialized metabolism2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine Microbial Natural Products and Biosynthesis Open access
Wonyong Kim, Ji Seon Kim, Young Woon Lim, Ákos T. Kovács, Kyo Bin Kang
1citations -
microbeSEG: A deep learning software tool with OMERO data management for efficient and accurate cell segmentation2022 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Cell Image Analysis Techniques Open access
Tim Scherr, Johannes Seiffarth, Bastian Wollenhaupt, Oliver Neumann, Marcel P. Schilling, Dietrich Kohlheyer, +3 more
1citations -
The biological activity of bacterial rhamnolipids is linked to their molecular structure2023 bioRxiv (Cold Spring Harbor Laboratory) preprint Agricultural and Biological Sciences Plant-Microbe Interactions and Immunity Open access
Bredenbruch Sandra, Müller Conrad, Atemnkeng Henry, Schröder Lukas, Till Tiso, Lars M. Blank, +2 more
2citations -
bletl - A Python Package for Integrating Microbioreactors in the Design-Build-Test-Learn Cycle2021 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Microbial Metabolic Engineering and Bioproduction Open access
Michael Osthege, Niklas Tenhaef, Rebecca Zyla, Carolin Müller, Johannes Hemmerich, Wolfgang Wiechert, +2 more
3citations -
The gut microbiome-linked long chain fatty acid stearate suppresses colorectal cancer2023 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Gut microbiota and health Open access
Mina Tsenkova, Madita Brauer, Vitaly Igorevich Pozdeev, Marat F. Kasakin, Susheel Bhanu Busi, Maryse Schmoetten, +18 more
0citations -
Multiple levels of transcriptional regulation control glycolate metabolism in Paracoccus denitrificans2024 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Bacterial Genetics and Biotechnology Open access
Lennart Schada von Borzyskowski, Lucas Hermann, Katharina Kremer, Sebastian Barthel, Bianca Pommerenke, Timo Glatter, +3 more
2citations
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