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Conserved Asp233–Asp246 hydrogen bond modulates active site dynamics in class A β ‐lactamases2026 Protein Science article Biochemistry, Genetics and Molecular Biology Antibiotic Resistance in Bacteria Open access
Cristina Valverde López-Gallego, Monika Timmer, Jocelyne Vreede, Marcellus Ubbink
0citations -
Reversible Glutamate Coordination to High-Valent Nickel Protects the Active Site of a [NiFe] Hydrogenase from Oxygen2022 Journal of the American Chemical Society article Energy Metalloenzymes and iron-sulfur proteins
Catharina J. Kulka‐Peschke, Anne-Christine Schulz, Christian Lorent, Yvonne Rippers, Stefan Wahlefeld, Janina Preissler, +15 more
36citations -
Conformation-Sensitive Active-Site Residue Tyrosine 260 in Paenibacillus macerans Cyclodextrin Glycosyltransferase Governs C13-Regioselective Glycosylation of Rebaudioside A2026 Journal of Agricultural and Food Chemistry article Biochemistry, Genetics and Molecular Biology Enzyme Catalysis and Immobilization
Binhao Wang, Zhaoyue Fan, Jie Zhang, Ulrich Schwaneberg, Ye Ni, Ruizhi Han
0citations -
Enhanced activity against a third-generation cephalosporin by destabilization of the active site of a class A beta-lactamase2023 International Journal of Biological Macromolecules article Biochemistry, Genetics and Molecular Biology Antibiotic Resistance in Bacteria Open access
Jing Sun, Aleksandra Chikunova, Aimee L. Boyle, Patrick Voskamp, Monika Timmer, Marcellus Ubbink
13citations -
Terminal spin labeling of xylotriose strongly affects interactions in the active site of xylanase BcX2025 Journal of Biomolecular NMR article Biochemistry, Genetics and Molecular Biology Electron Spin Resonance Studies Open access
Mahin Saberi, Leonardo Passerini, Martina Huber, Mark Overhand, Marcellus Ubbink
2citations -
Functional Enhancement of Recalcitrant Peroxidase Kerl via Fusion Strategy and Active-Site Redesign2025 Catalysts article Biochemistry, Genetics and Molecular Biology Enzyme Catalysis and Immobilization Open access
Binhao Wang, Xiangfei Lei, Jinjun Dong, Ulrich Schwaneberg, Ruizhi Han, Ye Ni
0citations -
Hydroxo-bridged active site of flavodiiron NO reductase revealed by NRVS and DFT2026 Proceedings of the National Academy of Sciences article Chemistry Metal-Catalyzed Oxygenation Mechanisms Open access
Filipe Folgosa, Vladimir Pelmenschikov, Giorgio Caserta, Matthias Keck, Christian Lorent, Konstantin Laun, +8 more
3citations -
Corrigendum to “Enhanced activity against a third-generation cephalosporin by destabilization of the active site of a class A beta-lactamase” [Int. J. Biol. Macromol. 250 (2023) 126160]2024 International Journal of Biological Macromolecules erratum Biochemistry, Genetics and Molecular Biology Antibiotic Resistance in Bacteria Open access
Jing Sun, Aleksandra Chikunova, Aimee L. Boyle, Patrick Voskamp, Monika Timmer, Marcellus Ubbink
0citations -
Investigating enzyme function by geometric matching of catalytic motifs2026 Protein Science article Biochemistry, Genetics and Molecular Biology Protein Structure and Dynamics Open access
R. Hackett, Ioannis G. Riziotis, Martin F. Larralde, António J. M. Ribeiro, Georg Zeller, Janet M. Thornton
0citations -
Investigating enzyme function by geometric matching of catalytic motifs2026 Zenodo (CERN European Organization for Nuclear Research) software Biochemistry, Genetics and Molecular Biology Protein Structure and Dynamics Open access
Ioannis G. Riziotis, Martin F. Larralde, António J. M. Ribeiro, Georg Zeller, Janet M. Thornton
0citations -
A Highly Active and Specific Benzoylformate Decarboxylase for Glycolaldehyde Production from Formaldehyde2025 ACS Catalysis article Biochemistry, Genetics and Molecular Biology Enzyme Catalysis and Immobilization
Junhui Zhou, Florian Bourdeaux, Vincent R. Emann, Tianwei Tan, Ulrich Schwaneberg
9citations -
Investigating Enzyme Function by Geometric Matching of Catalytic Motifs2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Protein Structure and Dynamics Open access
Ioannis G. Riziotis, Martin F. Larralde, António J. M. Ribeiro, Georg Zeller, Janet M. Thornton
2citations -
Phosphate ions modulate enzyme activity and epistatic effects in two clavulanic acid‐resistant β‐lactamase mutants2025 Protein Science article Biochemistry, Genetics and Molecular Biology Antibiotic Resistance in Bacteria Open access
Marko Radojković, Saar F. Koene, Aleksandra Chikunova, Bogdan I. Florea, Sivanandam V. Natarajan, Aimee L. Boyle, +1 more
3citations -
Aqueous ionic liquids redistribute local enzyme stability via long-range perturbation pathways2021 Computational and Structural Biotechnology Journal article Biochemistry, Genetics and Molecular Biology Enzyme Catalysis and Immobilization Open access
Till El Harrar, Benedikt Frieg, Mehdi D. Davari, Karl‐Erich Jaeger, Ulrich Schwaneberg, Holger Gohlke
21citations -
Critical assessment of structure-based approaches to improve protein resistance in aqueous ionic liquids by enzyme-wide saturation mutagenesis2021 Computational and Structural Biotechnology Journal article Biochemistry, Genetics and Molecular Biology Enzyme Catalysis and Immobilization Open access
Till El Harrar, Mehdi D. Davari, Karl‐Erich Jaeger, Ulrich Schwaneberg, Holger Gohlke
14citations -
Structure and Cooperativity in Substrate–Enzyme Interactions: Perspectives on Enzyme Engineering and Inhibitor Design2022 ACS Chemical Biology article Biochemistry, Genetics and Molecular Biology Enzyme Catalysis and Immobilization
Eerappa Rajakumara, Suman Abhishek, Kulhar Nitin, Dubey Saniya, Priyanka Bajaj, Ulrich Schwaneberg, +1 more
47citations -
Rational evolution of a recombinant DNA polymerase for efficient incorporation of unnatural nucleotides by dual-site boosting2022 Research Square preprint Biochemistry, Genetics and Molecular Biology Enzyme Catalysis and Immobilization Open access
Wenping Lyu, Ruyin Cao, Lili Zhai, Qingqing Xie, Zi Wang, Yue Zheng, +5 more
0citations -
Rational evolution of a recombinant DNA polymerase for efficient incorporation of unnatural nucleotides by dual-site boosting2022 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Enzyme Catalysis and Immobilization Open access
Ruyin Cao, Lili Zhai, Qingqing Xie, Zi Wang, Yue Zheng, Wenwei Zhang, +5 more
0citations