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Metabolic and Process Engineering for Microbial Production of Protocatechuate from Xylose with Corynebacterium glutamicum2021 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Microbial Metabolic Engineering and Bioproduction Open access
Jonas Görtz, Christian Brüsseler, Nicolai Kallscheuer, Jochem Gätgens, Andreas Jupke, Jan Marienhagen, +1 more
0citations -
Semi-automated background removal limits loss of data and normalises the images for downstream analysis of imaging mass cytometry data2020 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Marieke E. Ijsselsteijn, Antonios Somarakis, Boudewijn P. F. Lelieveldt, Thomas Höllt, Noel F.C.C. de Miranda
2citations -
Aspergillus -mediated allergic airway inflammation is triggered by dendritic cell recognition of a defined spore morphotype, a process that can be targeted via antifungal therapeutics2024 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine Asthma and respiratory diseases Open access
Emma L. Houlder, Sara Gago, George Vere, David Conn, Sheeba Khan, MW Shepherd, +5 more
0citations -
Task Engagement Gates Interareal Communication Geometry in the Mouse Thalamocortical–Midbrain Visual Circuit2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Neuroscience Neural dynamics and brain function Open access
Loris Amalberti, Maximilian Hauer, Corbett Bennett, Shawn R. Olsen, David Dahmen, Stefano Recanatesi
0citations -
PENGUIN: A rapid and efficient image preprocessing tool for multiplexed spatial proteomics2024 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Cell Image Analysis Techniques
Ana Marta Sequeira, Marieke E. Ijsselsteijn, Miguel Rocha, Noel F.C.C. de Miranda
3citations -
Computer-Aided Bioprocess and Solvent Design for Industrial Methyl Ketone Production2026 ChemRxiv preprint Biochemistry, Genetics and Molecular Biology Microbial Metabolic Engineering and Bioproduction Open access
Henry Hilker, Lukas Raßpe-Lange, Lukas Polte, Anita L. Ziegler, Clemens Kortmann, Alexander Mitsos, +2 more
0citations -
Stimulus-induced theta band LFP oscillations format neuronal representations of social chemosignals in the mouse accessory olfactory bulb2023 bioRxiv (Cold Spring Harbor Laboratory) preprint Neuroscience Olfactory and Sensory Function Studies Open access
Oksana Cohen, Anat Kahan, Sebastian T. Malinowski, Dan Rokni, Marc Spehr, Yoram Ben‐Shaul
0citations -
Correlative In Situ Cryo-ET Reveals Cellular and Viral Remodeling Associated with Selective HIV-1 Core Nuclear Import2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Immunology and Microbiology HIV Research and Treatment Open access
Zhen An Hou, Yao Shen, Stanley Fronik, Juan Shen, Jiong Shi, Jialu Xu, +5 more
4citations -
Ais: streamlining segmentation of cryo-electron tomography datasets2024 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Advanced Electron Microscopy Techniques and Applications Open access
Mart G.F. Last, Leoni Abendstein, Lenard M. Voortman, Thomas Harry Sharp
3citations -
GRIDGENE: Guided Region Identification based on Density of GENEs – a transcript density-based approach to characterize tissues by spatial transcriptomics2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Ana Marta Sequeira, Marieke E. Ijsselsteijn, Miguel Rocha, Jessica P Roelands, Noel F.C.C. de Miranda
3citations -
Benchmarking Imputation Methods for Single-Cell RNA Sequencing Data Using Peripheral Blood Mononuclear Cells from Acute Myocardial Infarction Patients0citations
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Rapid liquid biopsy assessment through gene profiling from the kidney biopsy transport medium: a technical validation and a proof-of-concept pilot study2024 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Molecular Biology Techniques and Applications Open access
Ziyang Li, Marij J.P. Welters, Baptiste Lamarthée, Aiko P. J. de Vries, Hans J. Baelde, Jesper Kers
0citations -
An optimized workflow for analyzing extracellular vesicles as biomarkers in liver diseases2023 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Extracellular vesicles in disease Open access
Martha Paluschinski, Sven Heiko Loosen, Claus Kordes, Verena Keitel, Anne Kuebart, Timo Brandenburger, +5 more
0citations