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FLAG-X: Hybrid machine learning workflows for automated gating of clinical flow cytometry data2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Cell Image Analysis Techniques Open access
Paul Martini, Marziyeh Mohammadi, Michael Christoph Thrun, David B. Blumenthal, Stefan W. Krause
0citations -
Comparison of the performance of two targeted metagenomic virus capture probe-based methods using synthetic viral sequences and clinical samples2023 medRxiv preprint Biochemistry, Genetics and Molecular Biology Genomics and Phylogenetic Studies Open access
Kees Mourik, Igor A. Sidorov, Ellen C. Carbo, David van der Meer, Arnoud Boot, Aloys C.M. Kroes, +3 more
4citations -
A system for independent evaluation of clinical prediction models while preserving intellectual property and data privacy2026 Zenodo (CERN European Organization for Nuclear Research) preprint Mathematics Statistical Methods in Epidemiology Open access
Joie Ensor, Ben Van Calster, Lasai Barreñada, Laure Wynants, Benjamin I. Perry
0citations -
Genosolver: Rare Disease Diagnosis through Holistic Integration of Unstructured Clinical Narratives Using Large Language and Reasoning Models2026 medRxiv preprint Biochemistry, Genetics and Molecular Biology Genomics and Rare Diseases Open access
Tanhim Islam, Martin Danner, Zain Ziad, Matthias Begemann, Danique Beijer, Annette Lischka, +21 more
0citations -
‘Omic-scale quantitative HILIC-MS/MS approach for circulatory lipid phenotyping in clinical research2022 ChemRxiv preprint Biochemistry, Genetics and Molecular Biology Metabolomics and Mass Spectrometry Studies Open access
Jessica M. Medina, Rébecca Borreggine, Tony Teav, Liang Gao, Shanshan Ji, Justin Carrard, +10 more
2citations -
Multicenter benchmarking of short and long read wet lab protocols for clinical viral metagenomics2024 medRxiv preprint Biochemistry, Genetics and Molecular Biology Genomics and Phylogenetic Studies Open access
F. Xavier López‐Labrador, Michael Huber, Igor A. Sidorov, Julianne Rose Brown, Lize Cuypers, Lies Laenen, +25 more
1citations -
A Baseline Survey on the Treatment Workflow and Pediatric IGRT Practice Among European Members of the Project-Based Consortium and the Pediatric Radiation Oncology Society (PROS).
C. Windmeijer, Arjan Bel, Rianne de Jong, Brian V. Balgobind, Marianne Camille Aznar, Karen Van Beek, +24 more
0citations -
Mutational Constraint Analysis Workflow for Overlapping Short Open Reading Frames and Genomic Neighbours2024 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Genomics and Rare Diseases Open access
Martin Danner, Matthias Begemann, Florian Kraft, Miriam Elbracht, Ingo Kurth, Jeremias Krause
0citations -
Cautiously optimistic about data-driven algorithms in paediatric critical care, nurses’ perspectives in low-resource settings: a pre-implementation and human-centred design study in Malawi
Margot M. Rakers, Daniel Mwale, Lieke de Mare, Lezzie Chirambo, Bart Bierling, Alice Likumbo, +7 more
0citations -
Cautiously optimistic about data-driven algorithms in paediatric critical care, nurses’ perspectives in low-resource settings: a pre-implementation and human-centred design study in Malawi
Margot M. Rakers, Daniel Mwale, Lieke de Mare, Lezzie Chirambo, Bart Bierling, Alice Likumbo, +7 more
0citations -
Improving cardiovascular population risk in primary care: protocol for the PROSPERA cluster-randomized controlled trial of a complex multilevel intervention
Vera A. M. C. Bongaerts, Rimke Cathelijne Vos, Steven H J Hageman, Ken Redekop, Jannick A N Dorresteijn, Mattijs Everard Numans, +1 more
0citations -
TraIT, Translational research IT bridging the valley of death in translational medicine2020 bioRxiv (Cold Spring Harbor Laboratory) preprint Decision Sciences Scientific Computing and Data Management Open access
Jan‐Willem Boiten, Rita Azevedo, Kees van Bochove, Marinel Cavelaars, Andre L.A.J. Dekker, Remond J.A. Fijneman, +7 more
1citations -
Haplomics: A Snakemake pipeline for haplotype-based association analysis in multi-omics studies2025 medRxiv preprint Biochemistry, Genetics and Molecular Biology Genetic Associations and Epidemiology Open access
Dariush Ghasemi-Semeskandeh, Luisa Foco, Ryosuke Fujii, Johannes Rainer, Mohadeseh Feli, Markus Ralser, +3 more
0citations -
Highly Repeatable Tissue Proteomics for Kidney Transplant Pathology: Technical and Biological Validation of Protein Analysis using LC-MS/MS2024 bioRxiv (Cold Spring Harbor Laboratory) preprint Chemistry Advanced Proteomics Techniques and Applications Open access
Rianne Hofstraat, Kristina Marx, Renata Blatnik, Nike Claessen, Hessel Peters Sengers, Sandrine Florquin, +2 more
3citations