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Cell-of-origin classification using the Hans and Lymph2Cx algorithms in primary cutaneous large B-cell lymphomas2022 Archiv für Pathologische Anatomie und Physiologie und für Klinische Medicin article Medicine Cutaneous lymphoproliferative disorders research Open access
Anne M.R. Schrader, Ruben A. L. de Groen, Rein Willemze, Patty M. Jansen, Koen D. Quint, Tom van Wezel, +10 more
20citations -
End-to-end classification of cell-cycle stages with center-cell focus tracker using recurrent neural networks2022 RWTH Publications (RWTH Aachen) article Biochemistry, Genetics and Molecular Biology Cell Image Analysis Techniques Open access
Abin Jose, Rijo Roy, Dennis Eschweiler, Ina Laube, Reza Azad, Daniel Moreno-Andrés, +1 more
0citations -
Evaluation of the modified Pittsburgh classification for predicting the disease‐free survival outcome of squamous cell carcinoma of the external auditory canal
Cindy H. Nabuurs, Wietske Kievit, Nilou Labbé, Charles René Leemans, Conrad F. G. M. Smit, Michiel W. M. van den Brekel, +11 more
21citations -
Donor-specific, but not sex-specific, signatures dominate cell-type classification in lung scRNA-seq data2026 Biochemistry and Biophysics Reports article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Nora Ghenciulescu, Marcel J. T. Reinders, Ahmed Essam Mahfouz
0citations -
A community-based transcriptomics classification and nomenclature of neocortical cell types2020 Nature Neuroscience article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Rafael Yuste, Michael Hawrylycz, Nadia Aalling, Argel Aguilar‐Valles, Detlev Arendt, Rubén Armañanzas, +59 more
30citations -
Allogeneic Stem Cell Transplantation for Patients with Acute Myeloid Leukemia with Myelodysplasia-Related Features in First Complete Remission As per the International Consensus Classification (ICC) 2022: A Study from the ALWP of the EBMT2024 Transplantation and Cellular Therapy article Medicine Acute Myeloid Leukemia Research Open access
Arnon Nagler, Myriam Labopin, Jurjen Versluis, Jaime Sanz, Tobias Gedde‐Dahl, David Burns, +11 more
1citations -
Prognostic value of CPSS cytogenetic risk classification in patients with CMML after allogeneic hematopoietic cell transplantation: a retrospective multicenter study of the Chronic Malignancies Working Party of the EBMT2022 Bone Marrow Transplantation article Medicine Hematopoietic Stem Cell Transplantation Open access
Christian Koenecke, Dirk‐Jan Eikema, Sheree Hazelaar, Thomas A. Schroeder, Victoria T. Potter, Nicolaus Martin Kröger, +19 more
5citations -
Borderline (suspicious) for T-cell-mediated rejection, the Banff classification's Achilles’ heel2024 Nephrology Dialysis Transplantation article Medicine Renal Transplantation Outcomes and Treatments Open access
Myrthe van Baardwijk, Anne Wagenmakers, Thierry P. P. van den Bosch, Dennis Alexander Hesselink, Alexandre Loupy, Rafael Kramann, +3 more
5citations -
Correlation of preoperative 18F-FDG-PET/CT tumor staging and maximum standardized uptake values with preoperative CT, postoperative tumor classification, and histopathological parameters of oral squamous cell carcinoma
Gunnar Müller, Daniel A. Veit, Philipp Becker, Daniel G. E. Thiem, Peer Wolfgang Kämmerer, Birte Diekmeyer, +3 more
0citations -
Validation of a classification and scoring system for the diagnosis of laryngeal and pharyngeal squamous cell carcinomas by confocal laser endomicroscopy2021 Brazilian Journal of Otorhinolaryngology article Medicine Head and Neck Cancer Studies Open access
Matti Sievert, Konstantinos Mantsopoulos, Sarina K. Mueller, Robin Rupp, Markus Eckstein, Florian Stelzle, +5 more
11citations -
SwarmMAP: swarm learning for decentralized cell type annotation in single cell sequencing data2026 npj Systems Biology and Applications article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Oliver Lester Saldanha, Vivien Goepp, Hyojin Kim, Jie Fu Zhu, Rafael Kramann, Sikander Hayat, +1 more
0citations -
Identification of Kidney Cell Types in Single-Cell RNA Sequencing and Single-Nucleus RNA Sequencing Data Using Machine-Learning Algorithms2024 Journal of the American Society of Nephrology article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics
Siddharth Madapoosi, Adam Tisch, Jan Rosa, Sean F. Eddy, Abhijit S. Naik, Christine P. Limonte, +8 more
0citations -
Deep-learning-based multi-class segmentation for automated, non-invasive routine assessment of human pluripotent stem cell culture status2020 Computers in Biology and Medicine article Biochemistry, Genetics and Molecular Biology Cell Image Analysis Techniques Open access cited by 1 patent
Tobias Piotrowski, Oliver Rippel, Andreas Elanzew, Bastian Nießing, Sebastian Stucken, Sven Jung, +6 more
50citations -
Identification of kidney cell types in scRNA-seq and snRNA-seq data using machine learning algorithms2024 Heliyon article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Adam Tisch, Siddharth Madapoosi, Stephen R. Blough, Jan Rosa, Sean F. Eddy, Laura H. Mariani, +9 more
3citations -
Extreme Diversity of the Human Vascular Mesenchymal Cell Landscape2020 Journal of the American Heart Association article Immunology and Microbiology Atherosclerosis and Cardiovascular Diseases Open access
Laura E. Bruijn, Brendy E.W.M. van den Akker, Connie M. van Rhijn, Jaap F. Hamming, Jan H.N. Lindeman
26citations -
A guide to the BRAIN Initiative Cell Census Network data ecosystem2023 PLoS Biology article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Michael Hawrylycz, Maryann Elizabeth Martone, Giorgio A. Ascoli, Jan Gunnar Bjaalie, Hong‐Wei Dong, Satrajit Ghosh, +92 more
53citations