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Integrating cell interaction with transcript factors to obtain a robust gene panel for prognostic prediction and therapies in cholangiocarcinoma2022 Research Square preprint Medicine Cholangiocarcinoma and Gallbladder Cancer Studies Open access
Tingjie Wang, Chuanrui Xu, Dan Xu, Xiaofei Yang, Yaxin Liu, Xiujuan Li, +4 more
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Validation of the Incremental Prognostic Value of Deceased Donation Pre-implantation Kidney Transplant Biopsies through Comprehensive Lesion Quantification with Deep Learning
Ziyang Li, Giorgio Buzzanca, Danny van der Helm, Soufian Meziyerh, Ian P.J. Alwayn, Dorottya K. de Vries, +3 more
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Bulk RNA sequencing deconvolution of pancreatic ductal adenocarcinoma identifies cancer-associated fibroblast subsets associated with survival and tumor microenvironment composition2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine Pancreatic and Hepatic Oncology Research Open access
Nicole Dam, Mischa Steketee, Gaby J. Strijk, Willem de Koning, Lukas J.A.C. Hawinkels, Vera Kemp, +2 more
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Glutamine and GLS1 are key metabolic checkpoints that Limit T cell Infiltration and Function in HNSCC2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine Cancer Immunotherapy and Biomarkers Open access
Sonja Decking, Ines Ugele, Katja Dettmer, Gabriel Horkovics-Kovats, Julian Kuenzel, Charlotte L. Zuur, +35 more
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TET CpG sequence context specific DNA demethylation shapes progression of IDH-mutant gliomas2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine Glioma Diagnosis and Treatment Open access
Youri Hoogstrate, Santoesha A. Ghisai, Levi van Hijfte, Iris J. de Heer, Marta Padovan, Maurice de Wit, +24 more
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Whole genome sequencing of endometrial cancer identifies novel subgroups, drivers, and actionable alterations2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Cancer Genomics and Diagnostics Open access
Sebastian Meyer, Ben Kinnersley, Katarzyna Kedzierska, Ignacio Soriano, Eszter Lakatos, Claudia Arnedo-Pac, +26 more
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Identification of a novel pyroptosis related long noncoding RNA subtypes, development of a prognostic model and characteristics of the tumor microenvironment in gastric cancer0citations
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KIF23 regulation by miR-107 controls replicative tumor cell fitness in mouse and human hepatocellular carcinoma2023 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology MicroRNA in disease regulation Open access
Sanchari Roy, Carolin Lohr, Rossella Pellegrino, Mihael Vucur, Michael T. Singer, Veronika Buettner, +7 more
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The NLRP1 inflammasome emerges as a promising therapeutic target and prognostic biomarker across multiple cancer types: A comprehensive pan-cancer analysis2024 Research Square preprint Biochemistry, Genetics and Molecular Biology Inflammasome and immune disorders Open access
Leila Habibipour, Mahboubeh Sadeghi, Alireza Raghibi, Amirhossein Mohajeri Khorasani, Pegah Mousavi, Nima Sanadgol
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From Diagnostic CT to DTI Tractography labels: Using Deep Learning for Corticospinal Tract Injury Assessment and Outcome Prediction in Intracerebral Haemorrhage2024 arXiv (Cornell University) preprint Medicine Intracerebral and Subarachnoid Hemorrhage Research Open access
Olivia N Murray, Hamied A. Haroon, Paul Ryu, Hiren C. Patel, George Harston, Marieke J.H. Wermer, +6 more
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Individualized treatment effect was predicted best by modeling baseline risk in interaction with treatment assignment2022 arXiv (Cornell University) preprint Mathematics Statistical Methods in Clinical Trials Open access
Alexandros Rekkas, Peter R. Rijnbeek, David M. Kent, Ewout Willem Steyerberg, David V. Klaveren
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Intra-tumoral genomic heterogeneity in rectal cancer: mutational status is dependent on preoperative biopsy depth and location.2020 Research Square preprint Biochemistry, Genetics and Molecular Biology Cancer Genomics and Diagnostics Open access
Floris A. Vuijk, Carlijn van de Water, Shannon van Lent - van Vliet, Maxime J.M. van der Valk, Femke Simmer, Cornelis J.�H. van de Velde, +3 more
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Spatially-resolved tumour infiltrating immune cells and prognosis in breast cancer2024 medRxiv preprint Biochemistry, Genetics and Molecular Biology Breast Cancer Treatment Studies Open access
Aaron J. Bernstein, Renske Keeman, Amber N. Hurson, Fiona M. Blows, Manjeet K. Bolla, Jodi L. Miller, +57 more
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