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Genolator: A Multimodal Large Language Model Fusing Natural Language, Genomic, and Structural Tokens for Protein Function Interpretation2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Machine Learning in Bioinformatics Open access
Martin Danner, Tanhim Islam, Matthias Begemann, Florian Kraft, Miriam Elbracht, Ingo Kurth, +1 more
0citations -
Retrieval for Extremely Long Queries and Documents with RPRS: A Highly Efficient and Effective Transformer-based Re-Ranker2023 ACM Transactions on Information Systems article Computer Science Information Retrieval and Search Behavior Open access
Arian Askari, Suzan Verberne, Amin Abolghasemi, Wessel Kraaij, Gabriella Pasi
29citations -
Retrieval for Extremely Long Queries and Documents with RPRS: a Highly Efficient and Effective Transformer-based Re-Ranker2023 arXiv (Cornell University) preprint Computer Science Information Retrieval and Search Behavior Open access
Arian Askari, Suzan Verberne, Amin Abolghasemi, Wessel Kraaij, Gabriella Pasi
1citations -
Electronic health records (EHRs) in clinical research and platform trials: Application of the innovative EHR-based methods developed by EU-PEARL2023 Journal of Biomedical Informatics article Health Professions Electronic Health Records Systems Open access
Giulia Lombardo, Camille Couvert, Melisa Kose, Amina Begum, Cécile Spiertz, Courtney Worrell, +19 more
23citations -
pyBiodatafuse: extending interoperability of data using modular queries across biomedical resources2026 Bioinformatics article Biochemistry, Genetics and Molecular Biology Bioinformatics and Genomic Networks Open access
Yojana Gadiya, Javier Millán Acosta, Ammar Ammar, Alejandro Adriaque Lozano, Delano Wetstede, Dominik Martinát, +4 more
2citations -
Integrating an XPath-Enhanced OPC UA Data Collection Into Industrial Communication2022 IEEE International Conference on Emerging Technologies and Factory Automation (ETFA) conference-paper Engineering Digital Transformation in Industry
Johannes Lipp, Max Kocher, Michael Rath, Sebastian Ulrich, Maximilian Rudack, Stefan Decker
1citations -
Leveraging large language models for enhanced process model comprehension2025 Decision Support Systems article Business, Management and Accounting Business Process Modeling and Analysis Open access
Humam Kourani, Alessandro Berti, Jasmin Hennrich, Wolfgang Kratsch, Robin Weidlich, Chiao-Yun Li, +3 more
11citations -
Experience in Genetic Counseling for GBA1 Variants in Parkinson's Disease2020 Movement Disorders Clinical Practice article Medicine Lysosomal Storage Disorders Research Open access
Jonas M. den Heijer, Jacobus Johannes van Hilten, Anneke J.A. Kievit, Vincenzo Bonifati, Geert Jan Groeneveld
9citations -
A Pipeline for the Usage of the Core Data Set of the Medical Informatics Initiative for Process Mining – A Technical Case Report2024 Studies in health technology and informatics book-chapter Business, Management and Accounting Business Process Modeling and Analysis Open access
Hauke Heidemeyer, Leo Auhagen, Raphael W. Majeed, Marco Pegoraro, Jonas Bienzeisler, Viki Peeva, +4 more
7citations -
Iterative Self-Incentivization Empowers Large Language Models as Agentic Searchers2025 neural information processing systems conference-paper Computer Science Information Retrieval and Search Behavior Open access
Zhengliang Shi, Lingyong Yan, Dawei Yin, Suzan Verberne, Maarten de Rijke, Zhaochun Ren
2citations -
Leveraging Large Language Models for Enhanced Process Model Comprehension2024 arXiv (Cornell University) preprint Business, Management and Accounting Business Process Modeling and Analysis Open access
Humam Kourani, Alessandro Berti, Jasmin Hennrich, Wolfgang Kratsch, Robin Weidlich, Chiao-Yun Li, +2 more
2citations -
FAIR GraphRAG: A Retrieval-Augmented Generation Approach for Semantic Data Analysis2025 IEEE International Conference on Knowledge Graph (ICKG) conference-paper Computer Science Research Data Management Practices Open access
Marlena Flüh, Soo-Yon Kim, Carolin Victoria Schneider, Sandra Geisler
1citations -
Large-scale insights into the biosynthetic potential of the Bacillus cereus group2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine Microbial Natural Products and Biosynthesis Open access
J. Blom, Joseph Wambui, Hadrien Gourlé, Martin F. Larralde, Vignesh Ramnath, Johan Henriksson, +1 more
0citations