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Benchmarking variational AutoEncoders on cancer transcriptomics data2023 PLoS ONE article Biochemistry, Genetics and Molecular Biology Gene expression and cancer classification Open access
Mostafa Eltager, Tamim Abdelaal, Mohammed Charrout, Ahmed Essam Mahfouz, Marcel J. T. Reinders, Stavros Makrodimitris
18citations -
Urinary peptidomic liquid biopsy for non-invasive differential diagnosis of chronic kidney disease2023 Nephrology Dialysis Transplantation article Medicine Chronic Kidney Disease and Diabetes Open access
Emmanouil Mavrogeorgis, Tianlin He, Harald Mischak, Agnieszka Latosińska, Antonia Vlahou, Joost Peter Schanstra, +6 more
20citations -
Nitrogen metabolism in Pseudomonas putida : functional analysis using random barcode transposon sequencing2021 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Microbial Metabolic Engineering and Bioproduction Open access
Matthias Schmidt, Allison N. Pearson, Matthew R. Incha, Mitchell G. Thompson, Edward E. K. Baidoo, Ramu D. Kakumanu, +5 more
2citations -
SCHNEL: Scalable clustering of high dimensional single-cell data2020 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Tamim Abdelaal, Paul de Raadt, Boudewijn P. F. Lelieveldt, Marcel J. T. Reinders, Ahmed Essam Mahfouz
2citations -
Ship operational data driven fuel efficiency assessment for shaft generator using input convex neural network2026 Energy Reports article Environmental Science Maritime Transport Emissions and Efficiency Open access
Daehyuk Kim, SoonSik Jang, Jung-il Lee, Shin Hyung Rhee, Hyukchan Kwon, Hyunhak Jeong
1citations -
Intratumoral heterogeneity in human hepatocellular carcinoma – a protein-based approach2023 Zeitschrift für Gastroenterologie article Medicine Hepatocellular Carcinoma Treatment and Prognosis
Thomas Ritz, Jana Baues, Oliver Krenkel, Jovan Tanevski, Julio Sáez-Rodríguez, Peter Schirmacher, +1 more
0citations -
Topological Trajectory Classification and Landmark Inference on Simplicial Complexes2024 2018 52nd Asilomar Conference on Signals, Systems, and Computers conference-paper Computer Science Topological and Geometric Data Analysis Open access
Vincent P. Grande, Josef Hoppe, Florian Frantzen, Michael T. Schaub
0citations