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Benchmarking Imputation Methods for Single-Cell RNA Sequencing Data Using Peripheral Blood Mononuclear Cells from Acute Myocardial Infarction Patients0citations
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MO-IOHinspector: Anytime Benchmarking of Multi-Objective Algorithms using IOHprofiler2024 arXiv (Cornell University) preprint Computer Science Advanced Multi-Objective Optimization Algorithms Open access
Diederick Vermetten, Jeroen Rook, Oliver Ludger Preuß, Jacob de Nobel, Carola Doerr, Manuel López‐Ibáñez, +2 more
0citations -
Warm-phase Microphysical Evolution in Large Eddy Simulations of Tropical Cumulus Congestus: Constraining Drop Size Distribution Evolution using Polarimetery Retrievals and a Thermal-Based Framework
McKenna Wallace Stanford, Ann M. Fridlind, Andrew S. Ackerman, Bastiaan van Diedenhoven, Jian Wang, Toshihisa Matsui, +2 more
0citations -
A Decade of Bayesian Optimization for Controller Tuning and Robot Learning: Tutorial, Review, and Future Prospects2026 arXiv (Cornell University) preprint Decision Sciences Advanced Bandit Algorithms Research Open access
David Stenger, Paul Brunzema, Johanna Menn, Alexander von Rohr, Angela P. Schoellig, Sebastian Trimpe
1citations -
Cross-comparison of state of the art neuromorphological simulators on modern CPUs and GPUs using the Brain Scaffold Builder2022 bioRxiv (Cold Spring Harbor Laboratory) preprint Computer Science Parallel Computing and Optimization Techniques Open access
Robin De Schepper, Nora Abi Akar, Thorsten Hater, B. F. B. Huisman, Egidio Ugo D'Angelo, Abigail Morrison, +1 more
2citations -
WALDO: community-Wide Annotation of γδ Lymphocytes in single-cell Data, Openly benchmarked2026 Zenodo (CERN European Organization for Nuclear Research) preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Farid Keramati, Moosa Rezwani, Likai Tan, David Hamilton, Zheng Song, Tao Yang, +10 more
0citations -
Comparison of Resources and Methods to infer Cell-Cell Communication from Single-cell RNA Data2021 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Daniel Dimitrov, Dénes Türei, Charlotte Boys, James Shiniti Nagai, Ricardo O. Ramirez Flores, Hyojin Kim, +5 more
23citations -
Cell DiffErential Expression by Pooling (CellDEEP) highlights issues in differential gene expression in scRNA-seq2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Yiyi Cheng, Toby Kettlewell, Ross F Laidlaw, Olympia M Hardy, Andrew McCluskey, Thomas D. Otto, +1 more
0citations -
FERMO: a Dashboard for Automated Prioritization of Molecular Features from Mass Spectral Data2022 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Metabolomics and Mass Spectrometry Studies Open access
Mitja M. Zdouc, Hannah E. Augustijn, Nataliia V. Machushynets, Lina M. Bayona, Sylvia Soldatou, Niek De Jonge, +5 more
17citations -
Grand Challenges for Predictive Modeling in Small Molecule Drug Discovery2026 ChemRxiv preprint Pharmacology, Toxicology and Pharmaceutics Computational Drug Discovery Methods Open access
Connor W. Coley, Marco De Vivo, Willem Jespers, Ashutosh S. Jogalekar, S Roy Kimura, Lucien Koenekoop, +6 more
6citations -
Cell-cell Communication Inference from Single-cell RNA-Seq Data: a Comparison of Methods and Resources2021 Research Square preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Daniel Dimitrov, Dénes Türei, Charlotte Boys, James Shiniti Nagai, Ricardo Ramirez Flores, Hyojin Kim, +5 more
3citations -
Large Language Models and Evolutionary Computation: A Critical Review of Bidirectional Interaction, Automated Algorithm Design, and Co-Adaptive Systems2025 arXiv (Cornell University) preprint Computer Science Metaheuristic Optimization Algorithms Research Open access
Dikshit Chauhan, Bapi Dutta, Indu Bala, Bas van Stein, Thomas Bäck
0citations