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2′-Fucosyllactose helps butyrate producers outgrow competitors in infant gut microbiota simulations2024 iScience article Biochemistry, Genetics and Molecular Biology Gut microbiota and health Open access
David M. Versluis, Ruud Schoemaker, Ellen Looijesteijn, Jan M.W. Geurts, Roeland M. H. Merks
7citations -
Proton pump inhibitors and gut microbiota dysbiosis: insights into the pathogenesis of ulcerative colitis2025 Frontiers in Microbiology article Biochemistry, Genetics and Molecular Biology Gut microbiota and health Open access
Feng Cao, Shuo Liu, Yanwei Liu, Yong Xin Qi, Yunsheng Cheng, Yong Wang, +1 more
7citations -
Unraveling interindividual differences and functional consequences of gut microbial metabolism of immunosuppressants2024 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Gut microbiota and health Open access
Maral Baghai Arassi, Nicolai Karcher, Eleonora Mastrorilli, Matthias Groß, Amber Brauer-Nikonow, David Czock, +3 more
6citations -
A toolkit for transposon libraries and functional genomics in intestinal Bacteroidales2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Bacterial Genetics and Biotechnology Open access
Carlos Geert Pieter Voogdt, Indra Roux, Nicolai Karcher, Afonso Martins Bravo, Lajos Kalmár, Vallo Varik, +4 more
5citations -
Simulations of the infant gut microbiota suggest that complex ecological interactions regulate effects of human milk oligosaccharides on microbial mucin consumption2024 bioRxiv (Cold Spring Harbor Laboratory) preprint Nursing Infant Nutrition and Health Open access
David M. Versluis, Clair Wijtkamp, Ellen Looijesteijn, Jan M.W. Geurts, Roeland M. H. Merks
2citations -
Comparison of 16S ribosomal RNA hypervariable regions in microbiome studies of anorexia nervosa2025 Frontiers in Microbiology article Biochemistry, Genetics and Molecular Biology Gut microbiota and health Open access
Arunabh Sharma, Nadia Andrea Andreani, Lara Keller, Beate Herpertz‐Dahlmann, Jochen Seitz, John F. Baines, +1 more
0citations -
2’-Fucosyllactose helps butyrate producers outgrow competitors in infant gut microbiota simulations2023 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Gut microbiota and health Open access
David M. Versluis, Ruud Schoemaker, Ellen Looijesteijn, Jan M.W. Geurts, Roeland M. H. Merks
0citations -
Chemoproteomic mapping of active glycan-processing networks in a defined gut microbiome2026 ChemRxiv preprint Biochemistry, Genetics and Molecular Biology Gut microbiota and health Open access
Isabelle B. Pickles, Thamy Lívia Ribeiro Côrrea, Qinnan Yang, Yurong Chen, Zirui Li, Nicole M. Koropatkin, +3 more
0citations -
Dietary butyrate alleviates high-fat diet-induced colonic mucosal impairment accompanied by increased gut-derived indole-3-acetic acid and enhanced PPARγ signaling2026 Frontiers in Endocrinology article Biochemistry, Genetics and Molecular Biology Gut microbiota and health Open access
Guoli Li, Sijing Dong, Chunhao Liu, Huan Yan, Jing Yang, Patrick C.N. Rensen, +2 more
0citations -
Development of the Microbiota and Associations With Birth Mode, Diet, and Atopic Disorders in a Longitudinal Analysis of Stool Samples, Collected From Infancy Through Early Childhood2020 Gastroenterology article Biochemistry, Genetics and Molecular Biology Gut microbiota and health Open access cited by 5 patents
Gianluca Galazzo, Niels van Best, Liene Bervoets, Isaac Oteng Dapaah, Paul H. M. Savelkoul, Mathias Walter Hornef, +12 more
313citations -
Carbon dioxide and trace oxygen concentrations impact growth and product formation of the gut bacterium Phocaeicola vulgatus2023 BMC Microbiology article Biochemistry, Genetics and Molecular Biology Microbial Metabolic Engineering and Bioproduction Open access
Laura Keitel, Kristina Braun, Maurice Finger, Udo Kosfeld, Stanislav Yordanov, Jochen Büchs
13citations -
Co-occurrence patterns of gut microbiome, antibiotic resistome and the perturbation of dietary uptake in captive giant pandas2024 Journal of Hazardous Materials article Biochemistry, Genetics and Molecular Biology Gut microbiota and health Open access
Yuhao Fu, Feiran Jia, Jingfang Su, Xinyao Xu, Yu‐Qin Zhang, Xiangzhen Li, +5 more
10citations -
OP0087 INTEGRATED SYSTEMS ANALYSIS OF THE GUT MICROBIOTA PHENOTYPES IN THE RHEUMATOID ARTHRITIS2022 Annals of the Rheumatic Diseases conference-abstract Biochemistry, Genetics and Molecular Biology Gut microbiota and health Open access
Jun Qiao, S. X. Zhang, M. J. Chang, S. Song, Ruiqing Zhao, Yamei Zhang, +1 more
0citations -
OP0254 MICROBIOTA AND CLINICAL RESPONSES TO BIOLOGICAL TREATMENT IN AXIAL SPONDYLOARTHRITIS: INSIGHTS FROM 2 YEAR FOLLOW UP OF THE GESPIC COHORT2025 Annals of the Rheumatic Diseases conference-abstract Medicine Spondyloarthritis Studies and Treatments Open access
Valeria Ríos Rodríguez, M. Essex, Murat Torğutalp, Fabian Nikolai Proft, H. Haibel, Mikhail Protopopov, +4 more
0citations -
The Roles of Gut Microbiome and Plasma Metabolites in the Associations between ABO Blood Groups and Insulin Homeostasis: The Microbiome and Insulin Longitudinal Evaluation Study (MILES)2022 Metabolites article Biochemistry, Genetics and Molecular Biology Gut microbiota and health Open access
Ruifang Li‐Gao, Kirk J. Grubbs, Alain Gerald Bertoni, Kristi Louise Hoffman, Joseph F. Petrosino, Gautam Ramesh, +10 more
5citations -
The lower airways microbiome and antimicrobial peptides in idiopathic pulmonary fibrosis differ from chronic obstructive pulmonary disease2022 PLoS ONE article Medicine Interstitial Lung Diseases and Idiopathic Pulmonary Fibrosis Open access
Kristel Svalland Knudsen, Sverre Lehmann, Rune Nielsen, Solveig Tangedal, Ingvild Haaland, Pieter Sicco Hiemstra, +1 more
13citations -
A distinct immunophenotype in children carrying the Blautia enterotype: The Generation R study2025 Clinical Immunology article Biochemistry, Genetics and Molecular Biology Gut microbiota and health Open access
Christina Großerichter-Wagener, Kirsten I. M. Looman, Sanne A. Beth, Djawad Radjabzadeh, Paul A. Gill, Kyra N. Smit, +5 more
2citations