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microbeSEG: A deep learning software tool with OMERO data management for efficient and accurate cell segmentation2022 PLoS ONE article Biochemistry, Genetics and Molecular Biology Cell Image Analysis Techniques Open access
Tim Scherr, Johannes Seiffarth, Bastian Wollenhaupt, Oliver Neumann, Marcel P. Schilling, Dietrich Kohlheyer, +3 more
11citations -
microbeSEG: A deep learning software tool with OMERO data management for efficient and accurate cell segmentation2022 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Cell Image Analysis Techniques Open access
Tim Scherr, Johannes Seiffarth, Bastian Wollenhaupt, Oliver Neumann, Marcel P. Schilling, Dietrich Kohlheyer, +3 more
1citations -
Loss of ABCA4 from photoreceptor discs triggers changes in glial cell homeostasis2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Retinal Development and Disorders Open access
Rossella Valenzano, Andrew J. McDonald, Carmen Gallego, Charlotte A. Andriessen, Ioannis Moustakas, Aat A. Mulder, +4 more
0citations -
K-Ras controls asymmetric cell divisions from the primary cilium2026 Cell Death and Disease article Biochemistry, Genetics and Molecular Biology Genetic and Kidney Cyst Diseases Open access
Rohan Chippalkatti, Elisabeth Schaffner‐Reckinger, Anthoula Gaigneaux, Sara Bottone, Christina Laurini, Yashar Rouzbahani, +6 more
1citations -
K-Ras controls asymmetric cell divisions from the primary cilium2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Genetic and Kidney Cyst Diseases Open access
Rohan Chippalkatti, Elisabeth Schaffner‐Reckinger, Anthoula Gaigneaux, Sara Bottone, Christina Laurini, Yashar Rouzbahani, +6 more
1citations -
Inter-Spheroid Proximity and Matrix Remodeling Determine CAF-Mediated Cancer Cell Invasion2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Cellular Mechanics and Interactions Open access
Pranav Mehta, Ankur Bordoloi, Cor J. Ravensbergen, M. Kristen David, Wilma E. Mesker, Gerrit‐Jan Liefers, +2 more
1citations -
Ageing of the Upper Airway Epithelial Niche Limits Tissue-Resident T Cell Immunity2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Immunology and Microbiology T-cell and B-cell Immunology Open access
Wesley Huisman, Lisa A. King, Youvika Singh, Alicia C. de Kroon, Rosanne A. M. Steenbergen, Iris van der Valk, +20 more
0citations -
Oncogenic Calreticulin Induces Immune Escape by Stimulating TGFβ Expression and Regulatory T-cell Expansion in the Bone Marrow Microenvironment2024 Cancer Research article Medicine Myeloproliferative Neoplasms: Diagnosis and Treatment Open access
Dominik Schmidt, Cornelia Endres, Rouven Hoefflin, Geoffroy Andrieux, Melissa Zwick, Nikolaos Karantzelis, +23 more
23citations -
Analyzing cell-type-specific dynamics of metabolism in kidney repair2022 Nature Metabolism article Biochemistry, Genetics and Molecular Biology Metabolomics and Mass Spectrometry Studies Open access
Gangqi Wang, Bram Heijs, Sarantos Kostidis, Ahmed Essam Mahfouz, Rosalie G. J. Rietjens, Roel Bijkerk, +8 more
182citations -
Tumour-derived factors prime microglia for immune checkpoint-mediated T-cell regulation2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Neuroscience Neuroinflammation and Neurodegeneration Mechanisms Open access
Luca D Schreurs, Jessica Barz, Trong-Hieu Nguyen, Jule Schmedding, Liudmila Lobastova, Patrick Hoelker, +9 more
0citations -
Cancer-Associated Fibroblast-Centric Risk Model Predicts Immunotherapy Resistance in Pancreatic Cancer and Reveals PLOD2 as a Key Stromal Therapeutic Target2025 Frontiers in Bioscience-Landmark article Medicine Pancreatic and Hepatic Oncology Research Open access
Pengwei Cao, Feng Cao, Zhihua null Shui, X. Zhang, Mengjie Lv, Hu Xu, +5 more
2citations -
Integrating cell interaction with transcription factors to obtain a robust gene panel for prognostic prediction and therapies in cholangiocarcinoma2022 Frontiers in Genetics article Medicine Cholangiocarcinoma and Gallbladder Cancer Studies Open access
Tingjie Wang, Chuanrui Xu, Dan Xu, Xiaofei Yang, Yaxin Liu, Xiujuan Li, +6 more
3citations -
Predicting cell-type-specific exon inclusion in the human brain reveals more complex splicing mechanisms in neurons than glia2024 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology RNA Research and Splicing Open access
Lieke Michielsen, Justine Hsu, Anoushka Joglekar, Natan Belchikov, Marcel J. T. Reinders, Hagen Tilgner, +1 more
4citations -
Leukemia inhibitory factor receptor inhibition reduces stenosis grade and total serum cholesterol levels in a mouse model for atherosclerosis2024 Cardiovascular Research article Immunology and Microbiology Atherosclerosis and Cardiovascular Diseases Open access
Esmeralda Hemme, MAC Depuydt, Peter J. van Santbrink, Lucie Delfos, Johan Kuiper, Ilze Bot
0citations