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The landscape of tertiary lymphoid structures in endometrial cancer revealed through harmonized multi-level transcriptomics2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine Cancer Immunotherapy and Biomarkers Open access
Marta Requesens, Koen Brummel, Arkajyoti Bhattacharya, Feija Somefun, Nienke van Rooij, Annechien Plat, +10 more
0citations -
Identifying physical structures in our Galaxy with Gaussian Mixture Models: An unsupervised machine learning technique2023 arXiv (Cornell University) preprint Physics and Astronomy Astrophysics and Star Formation Studies Open access
M. Tiwari, Rogier Kievit, S. Kabanovic, Lars Bonne, Fabrizio Falasca, C. Guevara, +11 more
0citations -
Genome-wide mapping of therapeutically-relevant SARS-CoV-2 RNA structures2020 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology RNA and protein synthesis mechanisms Open access cited by 5 patents
Ilaria Manfredonia, Chandran Nithin, Almudena Ponce-Salvatierra, Pritha Ghosh, Tomasz K. Wirecki, Tycho Marinus, +5 more
22citations -
scTopoGAN: unsupervised manifold alignment of single-cell data2022 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Akash Kumar Singh, Marcel J. T. Reinders, Ahmed Essam Mahfouz, Tamim Abdelaal
1citations -
DAISIEprep: an R package for the extraction and formatting of data for the island biogeography model DAISIE2023 bioRxiv (Cold Spring Harbor Laboratory) preprint Environmental Science Ecology and Vegetation Dynamics Studies Open access
Joshua W. Lambert, Lizzie Roeble, Théo Pannetier, Rampal S. Etienne, Luís Valente
0citations -
Faraday tomography of LoTSS-DR2 data: III. Revealing the Local Bubble and the complex of local interstellar clouds in the high-latitude inner Galaxy2024 arXiv (Cornell University) preprint Physics and Astronomy Astrophysics and Star Formation Studies Open access
A. Erceg, Vibor Jelić, M. Haverkorn, L. Gajović, M. J. Hardcastle, T. W. Shimwell, +1 more
0citations -
Clustering of red-sequence galaxies in the fourth data release ofthe Kilo-Degree Survey2020 arXiv (Cornell University) preprint Physics and Astronomy Galaxies: Formation, Evolution, Phenomena Open access
Mohammadjavad Vakili, Henk Hoekstra, Maciej Bilicki, Maria Cristina Fortuna, Konrad H. Kuijken, Angus H. Wright, +10 more
4citations -
Tree-Based Learning on Amperometric Time Series Data Demonstrates High Accuracy for Classification2023 arXiv (Cornell University) preprint Chemistry Electrochemical Analysis and Applications Open access
Jeyashree Krishnan, Zeyu Lian, Pieter E. Oomen, Xiulan He, Soodabeh Majdi, Andreas Schuppert, +1 more
1citations -
WALDO: community-Wide Annotation of γδ Lymphocytes in single-cell Data, Openly benchmarked2026 Zenodo (CERN European Organization for Nuclear Research) preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Farid Keramati, Moosa Rezwani, Likai Tan, David Hamilton, Zheng Song, Tao Yang, +10 more
0citations -
plantR: An R package and workflow for managing species records from biological collections2021 bioRxiv (Cold Spring Harbor Laboratory) preprint Computer Science Research Data Management Practices Open access
Renato A. Ferreira de Lima, Andrea Sánchez‐Tapia, Sara Ribeiro Mortara, Hans ter Steege, Marinez Ferreira de Siqueira
10citations -
Investigating Enzyme Function by Geometric Matching of Catalytic Motifs2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Protein Structure and Dynamics Open access
Ioannis G. Riziotis, Martin F. Larralde, António J. M. Ribeiro, Georg Zeller, Janet M. Thornton
2citations