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Establishment of a tissue processing workflow and analysis of the influence of formalin fixation and paraffin embedding on the spectral bioinformation of salivary gland tumors2022 Laryngo-Rhino-Otologie article Biochemistry, Genetics and Molecular Biology Spectroscopy Techniques in Biomedical and Chemical Research Open access
Till Jasper Meyer, Elena Hartmann, Mona Stefanakis, Miriam C. Bassler, Marc Brecht, Rudolf Hagen, +2 more
0citations -
Proteome Analysis of Glomerular Formalin-Fixed Paraffin Embedded Kidney Samples Distinguishes Diabetic Nephropathy from Controls2021 Journal of the American Society of Nephrology article Medicine Renal Diseases and Glomerulopathies Open access
Sophie I. Nagelkerken, George M. C. Janssen, Kimberley Veraar, Peter A. van Veelen, Hans J. Baelde, Roy Lardenoije, +3 more
0citations -
Sample preparation of formalin-fixed paraffin-embedded tissue sections for MALDI-mass spectrometry imaging2020 Analytical and Bioanalytical Chemistry article Chemistry Mass Spectrometry Techniques and Applications Open access
Juliane Hermann, Heidi Noels, Wendy Theelen, Michaela Lellig, Setareh Orth-Alampour, Peter Boor, +2 more
73citations -
Histo-LOOP: A Novel Embedding Tool for Standardizing, Simplifying, and Advancing Histological Tissue Preparation2025 Journal of Histochemistry & Cytochemistry article Medicine Classical Anatomy and Histology Open access
Pakhwan Nilcham, Mamdouh Afify, Nicole Schaaps, Carolina Neu, Rahma Shahin, Andreas Prescher, +1 more
1citations -
Highly Repeatable Tissue Proteomics for Kidney Transplant Pathology: Technical and Biological Validation of Protein Analysis Using Liquid Chromatography-Tandem Mass Spectrometry/Mass Spectrometry (LC-MS/MS)2026 Laboratory Investigation article Chemistry Advanced Proteomics Techniques and Applications Open access
Rianne Hofstraat, Kristina Marx, Renata Blatnik, Nike Claessen, Hessel Peters Sengers, Sandrine Florquin, +2 more
3citations -
The Impact of Tissue Preparation on Salivary Gland Tumors Investigated by Fourier-Transform Infrared Microspectroscopy2023 Journal of Clinical Medicine article Biochemistry, Genetics and Molecular Biology Spectroscopy Techniques in Biomedical and Chemical Research Open access
Mona Stefanakis, Miriam C. Bassler, Tobias R. Walczuch, Elena Hartmann, Almoatazbellah Youssef, Agmal Scherzad, +7 more
7citations -
Highly Repeatable Tissue Proteomics for Kidney Transplant Pathology: Technical and Biological Validation of Protein Analysis using LC-MS/MS2024 bioRxiv (Cold Spring Harbor Laboratory) preprint Chemistry Advanced Proteomics Techniques and Applications Open access
Rianne Hofstraat, Kristina Marx, Renata Blatnik, Nike Claessen, Hessel Peters Sengers, Sandrine Florquin, +2 more
3citations -
Recognition of pseudoinvasion in colorectal adenoma using spatial glycomics2024 Frontiers in Medicine article Biochemistry, Genetics and Molecular Biology Glycosylation and Glycoproteins Research Open access
Fanny Boyaval, Arantza Fariña Sarasqueta, Jurjen J. Boonstra, Bram Heijs, Hans Morreau
3citations -
Few Shot Learning for the Classification of Confocal Laser Endomicroscopy Images of Head and Neck Tumors2023 arXiv (Cornell University) preprint Computer Science Domain Adaptation and Few-Shot Learning Open access
Marc Aubreville, Zhaoya Pan, Matti Sievert, Jonas Ammeling, Jonathan Ganz, Nicolai Oetter, +3 more
0citations -
A 34-Marker Panel for Imaging Mass Cytometric Analysis of Human Snap-Frozen Tissue2020 Frontiers in Immunology article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Nannan Guo, Vincent van Unen, Marieke E. Ijsselsteijn, Laura F. Ouboter, Andrea E. van der Meulen‐de Jong, Susana M. Chuva de Sousa Lopes, +3 more
45citations -
The coding microsatellite mutation profile of PMS2-deficient colorectal cancer2021 Experimental and Molecular Pathology article Medicine Genetic factors in colorectal cancer Open access
Sanne W. ten Broeke, Alexej Ballhausen, Aysel Ahadova, Manon Suerink, Lena Bohaumilitzky, Florian Seidler, +8 more
20citations -
Techniques for the standard histological and ultrastructural assessment of nerve biopsies2021 Journal of the Peripheral Nervous System article Medicine Peripheral Neuropathies and Disorders Open access
Joachim Weis, István Katona, Stefan Nikolin, Lucilla Nobbio, Valeria Prada, Marina Grandis, +1 more
14citations -
The biodistribution of polystyrene nanoparticles administered intravenously in the chicken embryo2024 Environment International article Environmental Science Microplastics and Plastic Pollution Open access
Meiru Wang, Shuhao Chen, Shixiong Cheng, Tom A.P. Nederstigt, Robert E. Poelmann, Marco C. DeRuiter, +5 more
14citations -
Spatio-temporal transcriptomic analysis reveals distinct nephrotoxicity, DNA damage, and regeneration response after cisplatin2025 Cell Biology and Toxicology article Pharmacology, Toxicology and Pharmaceutics Chemotherapy-induced organ toxicity mitigation Open access cited by 1 patent
Lukas S. Wijaya, Steven J. Kunnen, Panuwat Trairatphisan, Ciaran P. Fisher, Meredith E. Crosby, Kai Schaefer, +11 more
11citations -
Colorectal polyps: Targets for fluorescence‐guided endoscopy to detect high‐grade dysplasia and T1 colorectal cancer2023 United European Gastroenterology Journal article Medicine Colorectal Cancer Screening and Detection Open access
Nik Dekkers, Elham Zonoobi, Hao Dang, Mats I. Warmerdam, Stijn Crobach, Alexandra M. J. Langers, +8 more
5citations