Papers matching “interactive data analysis” 969
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iSODA: A Comprehensive Tool for Integrative Omics Data Analysis in Single- and Multi-Omics Experiments2025 Analytical Chemistry article Biochemistry, Genetics and Molecular Biology Bioinformatics and Genomic Networks Open access
Damien Olivier‐Jimenez, Rico J. E. Derks, Oscar Harari, Carlos C Cruchaga, Muhammad Ali, Alessandro Ori, +5 more
10citations -
iSODA: A Comprehensive Tool for Integrative Omics Data Analysis in Single- and Multi-Omics Experiments2024 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Bioinformatics and Genomic Networks Open access
Damien Olivier‐Jimenez, Rico J. E. Derks, Oscar Harari, Carlos C Cruchaga, Muhammad Asri Mohd Ali, Alessandro Ori, +5 more
0citations -
Cytosplore-Transcriptomics: a scalable inter-active framework for single-cell RNA sequencing data analysis2020 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Tamim Abdelaal, Jeroen Eggermont, Thomas Höllt, Ahmed Essam Mahfouz, Marcel J. T. Reinders, Boudewijn P. F. Lelieveldt
2citations -
CNVizard—a lightweight streamlit application for an interactive analysis of copy number variants2024 BMC Bioinformatics article Biochemistry, Genetics and Molecular Biology Genomic variations and chromosomal abnormalities Open access
Jeremias Krause, Carlos Classen, Daniela Dey, Eva Lausberg, Luise Kessler, Thomas Eggermann, +3 more
6citations -
MoMo - Combining Neuron Morphology and Connectivity for Interactive Motif Analysis in Connectomes2025 IEEE Transactions on Visualization and Computer Graphics article Computer Science Data Visualization and Analytics Open access
Michael Fekadu Shewarega, Jakob Troidl, Oliver Alvarado Rodriguez, Mohammad Dindoost, Hannah Haberkern, Johannes Stegmaier, +2 more
1citations -
MoMo - Combining Neuron Morphology and Connectivity for Interactive Motif Analysis in Connectomes2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Computer Science Data Visualization and Analytics Open access
Michael Fekadu Shewarega, Jakob Troidl, Oliver Alvarado Rodriguez, Mohammad Dindoost, Philipp Harth, Hannah Haberkern, +3 more
0citations -
MA ‐cont:pre/post effect size: An interactive tool for the meta‐analysis of continuous outcomes using R Shiny2022 Research Synthesis Methods article Decision Sciences Meta-analysis and systematic reviews Open access
Katerina Papadimitropoulou, Richard D Riley, Olaf M. Dekkers, Theo Stijnen, Saskia le Cessie
21citations -
DA4RDM: Data Analysis for Research Data Management Systems2021 International Joint Conference on Knowledge Discovery, Knowledge Engineering and Knowledge Management conference-paper Computer Science Research Data Management Practices Open access
M. Amin Yazdi, David Schimmel, Marcel Nellesen, Marius Politze, Matthias Müller
2citations -
Cytosplore-Transcriptomics: a scalable inter-active framework for single-cell RNA sequenc-ing data analysis2020 Zenodo (CERN European Organization for Nuclear Research) dataset Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Tamim Abdelaal, Jeroen Eggermont, Thomas Höllt, Ahmed Essam Mahfouz, Marcel J. T. Reinders, Boudewijn P. F. Lelieveldt
0citations -
Cytosplore-Transcriptomics: a scalable inter-active framework for single-cell RNA sequenc-ing data analysis2020 Zenodo (CERN European Organization for Nuclear Research) dataset Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Tamim Abdelaal, Jeroen Eggermont, Thomas Höllt, Ahmed Essam Mahfouz, Marcel J. T. Reinders, Boudewijn P. F. Lelieveldt
0citations -
Meta‐analysis of continuous outcomes: Using pseudo IPD created from aggregate data to adjust for baseline imbalance and assess treatment‐by‐baseline modification2020 Research Synthesis Methods article Decision Sciences Meta-analysis and systematic reviews Open access
Katerina Papadimitropoulou, Theo Stijnen, Richard D Riley, Olaf M. Dekkers, Saskia le Cessie
26citations -
SpaceWalker: Interactive Gradient Exploration for Spatial Transcriptomics Data2023 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Chang Li, Julian Thijssen, Tamim Abdelaal, Thomas Höllt, Boudewijn P. F. Lelieveldt
2citations -
CNVizard – a lightweight streamlit application for an interactive analysis of copy number variants2024 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Genomic variations and chromosomal abnormalities Open access
Jeremias Krause, Carlos Classen, Daniela Dey, Eva Lausberg, Luise Kessler, Thomas Eggermann, +3 more
1citations -
Development and validation of a clinical prediction model for the diagnostic management of acute pulmonary embolism: an individual participant data meta-analysis2023 European Heart Journal article Medicine Venous Thromboembolism Diagnosis and Management Open access
Geert‐Jan Geersing, Toshihiko Takada, Noémie Kraaijpoel, Frederikus Albertus Klok, Milou A.M. Stals, Yonathan Freund, +9 more
0citations -
RGT: a toolbox for the integrative analysis of high throughput regulatory genomics data2023 BMC Bioinformatics article Biochemistry, Genetics and Molecular Biology Genomics and Chromatin Dynamics Open access
Zhijian Li, Chao‐Chung Kuo, Fabio Ticconi, Mina Shaigan, Julia Gehrmann, Eduardo Gade Gusmao, +4 more
24citations -
RGT: a toolbox for the integrative analysis of high throughput regulatory genomics data2023 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Genomics and Chromatin Dynamics Open access
Zhijian Li, Chao‐Chung Kuo, Fabio Ticconi, Mina Shaigan, Eduardo Gade Gusmao, Manuel Allhoff, +3 more
2citations -
Development of 24-Hour Rhythms in Cortisol Secretion Across Infancy: A Systematic Review and Meta-Analysis of Individual Participant Data2024 The Journal of Clinical Endocrinology & Metabolism review Medicine Adrenal Hormones and Disorders Open access
Laura Kervezee, Michelle Romijn, Kirsten N.G. van de Weijer, Britney S J Chen, George Louis Burchell, Marieke S. Tollenaar, +17 more
12citations