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Performance of spectral flow cytometry and mass cytometry for the study of innate myeloid cell populations2023 Frontiers in Immunology article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Kyra van der Pan, Indu Khatri, Anniek L. de Jager, Alesha Louis, Sara Kassem, Brigitta A. E. Naber, +7 more
27citations -
A Comprehensive Workflow for Applying Single-Cell Clustering and Pseudotime Analysis to Flow Cytometry Data2020 The Journal of Immunology article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Janine E. Melsen, Monique M. van Ostaijen-ten Dam, Arjan C. Lankester, Marco W. Schilham, Erik B. van den Akker
56citations -
Improved Standardization of Flow Cytometry Diagnostic Screening of Primary Immunodeficiency by Software-Based Automated Gating2020 Frontiers in Immunology article Immunology and Microbiology Immunodeficiency and Autoimmune Disorders Open access
Eleni A. Linskens, Annieck M. Diks, Jana Neirinck, Martín Pérez‐Andrés, Emilie De Maertelaere, Magdalena A. Berkowska, +7 more
21citations -
FLAG-X: Hybrid machine learning workflows for automated gating of clinical flow cytometry data2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Cell Image Analysis Techniques Open access
Paul Martini, Marziyeh Mohammadi, Michael Christoph Thrun, David B. Blumenthal, Stefan W. Krause
0citations -
Guidelines for the use of flow cytometry and cell sorting in immunological studies (third edition)2021 European Journal of Immunology article Immunology and Microbiology T-cell and B-cell Immunology Open access
Andrea Cossarizza, Hyun‐Dong Chang, Andreas Radbruch, Sergio Abrignani, Richard Addo, Mübeccel Akdiş, +92 more
515citations -
Flow cytometry and machine learning enable identification of allergenic urban tree pollen2026 Atmospheric measurement techniques article Medicine Allergic Rhinitis and Sensitization Open access
Sarah Tardif, Maria Raquel Kanieski, Gauthier Lapa, Grégoire Bonnamour, Rita Sousa‐Silva, Isabelle Laforest‐Lapointe, +1 more
0citations -
Guidelines for DC preparation and flow cytometry analysis of mouse nonlymphoid tissues2022 European Journal of Immunology article Immunology and Microbiology Immunotherapy and Immune Responses Open access
Hans Christian Probst, Patrizia Stoitzner, Lukas Amon, Ronald A. Backer, Anna Brand, Jianzhou Chen, +32 more
20citations -
The Dilution Paradox in Extracellular Vesicle Flow Cytometry2026 Journal of Extracellular Vesicles article Biochemistry, Genetics and Molecular Biology Extracellular vesicles in disease Open access
Joyce Rops, Naomi C. Buntsma, Aleksandra Gąsecka, Leonie de Rond, Anne Yaël Nossent, Nyika D. Kruyt, +2 more
2citations -
Flow cytometry for the assessment of blood tumour burden in cutaneous T‐cell lymphoma: towards a standardized approach2022 British Journal of Dermatology article Medicine Cutaneous lymphoproliferative disorders research Open access
Maarten H. Vermeer, Hélène Moins‐Teisserenc, Martine Bagot, Pietro Quaglino, Sean J Whittaker
38citations -
Flow Cytometry Immunophenotyping for Diagnostic Orientation and Classification of Pediatric Cancer Based on the EuroFlow Solid Tumor Orientation Tube (STOT)
Cristiane de Sá Ferreira-Facio, Vitor Botafogo, Patrícia Mello Ferrão, Maria Clara Canellas, Cristiane Bedran Milito, Sérgio de Oliveira Romano, +16 more
14citations -
Research-based flow cytometry assays for pathogenic assessment in the human B-cell biology of gene variants revealed in the diagnosis of inborn errors of immunity: a Bruton’s tyrosine kinase case-study2023 Frontiers in Immunology article Immunology and Microbiology Immunodeficiency and Autoimmune Disorders Open access
Lucía del Pino Molina, Yolanda Soto Serrano, Keren Reche Yebra, J. Marty Lobo, B. González Martínez, María Bravo García‐Morato, +3 more
4citations -
A 37-color spectral flow cytometry panel to characterize phenotype and cytokine expression in human intestinal T cells2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Immunology and Microbiology T-cell and B-cell Immunology Open access
Ciska Lindelauf, Qinyue Jiang, Frits Koning, Andrea E. van der Meulen‐de Jong, Vincent van Unen, María Fernanda Pascutti
0citations -
PIDgeon: An Explainable AI Model for Improved Flow Cytometry-Based Screening of Lymphoid Primary Immunodeficiencies2025 Clinical Chemistry article Immunology and Microbiology Immunodeficiency and Autoimmune Disorders Open access
Annelies Emmaneel, Jana Neirinck, Alba Torres‐Valle, Sofie Van Gassen, Sarah Bonte, Malicorne Buysse, +12 more
0citations -
Species-targeted sorting and cultivation of commensal bacteria from the gut microbiome using flow cytometry under anaerobic conditions2022 Microbiome article Biochemistry, Genetics and Molecular Biology Gut microbiota and health Open access cited by 1 patent
Samuel Bellais, Mélanie Nehlich, Maryne Ania, Aurore Duquenoy, Ger van den Engh, Jan Baijer, +4 more
70citations -
Development of a standardized and validated flow cytometry approach for monitoring of innate myeloid immune cells in human blood2022 Frontiers in Immunology article Immunology and Microbiology Inflammation biomarkers and pathways Open access
Kyra van der Pan, Sandra de Bruin-Versteeg, Daniela Damasceno, Alejandro Hernández-Delgado, Alita J. van der Sluijs‐Gelling, Wouter B. L. van den Bossche, +22 more
17citations