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Antimicrobial susceptibility profile of clinically relevant Bacteroides , Phocaeicola , Parabacteroides and Prevotella species, isolated by eight laboratories in the Netherlands2024 Journal of Antimicrobial Chemotherapy article Biochemistry, Genetics and Molecular Biology Antibiotic Resistance in Bacteria Open access
Kathleen E. Boiten, Daan W. Notermans, Rob J. Rentenaar, Joffrey van Prehn, Lonneke G. M. Bode, Ianthe Maat, +8 more
13citations -
Total Synthesis and Structural Studies of Zwitterionic Bacteroides fragilis Polysaccharide A1 Fragments2023 Journal of the American Chemical Society article Chemistry Carbohydrate Chemistry and Synthesis Open access
Zhen Wang, Ana M. Poveda, Qingju Zhang, Luca Unione, Herman S. Overkleeft, Gijsbert A. van der Marel, +2 more
16citations -
Characterization of mobile genetic elements in multidrug-resistant Bacteroides fragilis isolates from different hospitals in the Netherlands2023 Anaerobe article Biochemistry, Genetics and Molecular Biology Antibiotic Resistance in Bacteria Open access
Kathleen E. Boiten, Ed J. Kuijper, L. Schuele, Joffrey van Prehn, Lonneke G. M. Bode, Ianthe Maat, +4 more
12citations -
Bacteroides fragilis fucosidases facilitate growth and invasion of Campylobacter jejuni in the presence of mucins2020 Cellular Microbiology article Agricultural and Biological Sciences Salmonella and Campylobacter epidemiology Open access
Yvette M. C. A. Luijkx, N Bleumink, Jianbing Jiang, Herman S. Overkleeft, Marc M. S. M. Wösten, Karin Strijbis, +1 more
32citations -
Horizontal gene transfer of a cfiA element between two different Bacteroides species within a clinical specimen2023 Clinical Microbiology and Infection article Biochemistry, Genetics and Molecular Biology Antibiotic Resistance in Bacteria Open access
A.C.M. Veloo, Kathleen E. Boiten, Antoni P. A. Hendrickx, Joffrey van Prehn, John W. A. Rossen
5citations -
The role of the gut microbiota in chemotherapy response, efficacy and toxicity: a systematic review2025 npj Precision Oncology review Biochemistry, Genetics and Molecular Biology Gut microbiota and health Open access
Doortje T.M.M. Böhm, Emma Russ, Henk‐Jan Guchelaar, Janine Ziemons, John Penders, Marjolein L. Smidt, +2 more
43citations -
The relative abundance of fecal bacterial species belonging to the Firmicutes and Bacteroidetes phyla is related to plasma levels of bile acids in young adults2023 Metabolomics article Biochemistry, Genetics and Molecular Biology Gut microbiota and health Open access
Francisco J. Osuna‐Prieto, Huiwen Xu, Lourdes Ortiz-Alvarez, Xinyu Di, Isabelle Köhler, Lucas Jurado‐Fasoli, +8 more
13citations -
Human intestinal Bacteria Collection (HiBC): Isolates and genomes metadata2025 Zenodo (CERN European Organization for Nuclear Research) dataset Biochemistry, Genetics and Molecular Biology Gut microbiota and health Open access
Thomas C. A. Hitch, Johannes M. Masson, Charlie Pauvert, Nicole Simone Treichel, Afrizal Afrizal, Thomas Riedel, +2 more
0citations -
Diversity, compositional and functional differences between gut microbiota of children and adults2020 Scientific Reports article Biochemistry, Genetics and Molecular Biology Gut microbiota and health Open access
Djawad Radjabzadeh, Cindy Germaine Boer, Sanne A. Beth, Pelle van der Wal, Jessica C. Kiefte–de Jong, Michelle A. E. Jansen, +11 more
194citations -
Associations between habitual diet, metabolic disease, and the gut microbiota using latent Dirichlet allocation2021 Microbiome article Biochemistry, Genetics and Molecular Biology Gut microbiota and health Open access
Taylor A. Breuninger, Nina Wawro, Jakob Breuninger, Sandra Reitmeier, Thomas Clavel, Julia Six-Merker, +8 more
86citations -
Human milk oligosaccharide 2’-fucosyllactose protects against high-fat diet-induced obesity by changing intestinal mucus production, composition and degradation linked to changes in gut microbiota and faecal proteome profiles in mice
Paola Paone, Dimitrios Latousakis, Romano Terrasi, Didier Vertommen, Ching Jian, Valentina Borlandelli, +12 more
69citations -
The Bacterial Gut Microbiota of Adult Patients Infected, Colonized or Noncolonized by Clostridioides difficile2020 Microorganisms article Medicine Clostridium difficile and Clostridium perfringens research Open access cited by 1 patent
Monique J. T. Crobach, Quinten R. Ducarmon, Elisabeth M. Terveer, Céline Harmanus, Ingrid M. J. G. Sanders, Kees Verduin, +2 more
46citations -
Bacterial and Parasitic Pathogens as Risk Factors for Cancers in the Gastrointestinal Tract: A Review of Current Epidemiological Knowledge2021 Frontiers in Microbiology article Biochemistry, Genetics and Molecular Biology Gut microbiota and health Open access
Janneke W. Duijster, Eelco Franz, Jacques Neefjes, Lapo Mughini‐Gras
25citations -
Process analysis of the anaerobe Phocaeicola vulgatus in a shake flasks and fermenter reveals pH and product inhibition2024 Annals of Microbiology article Biochemistry, Genetics and Molecular Biology Gut microbiota and health Open access
Laura Keitel, Katharina Miebach, Lea Rummel, Stanislav Yordanov, Jochen Büchs
22citations -
2′-Fucosyllactose helps butyrate producers outgrow competitors in infant gut microbiota simulations2024 iScience article Biochemistry, Genetics and Molecular Biology Gut microbiota and health Open access
David M. Versluis, Ruud Schoemaker, Ellen Looijesteijn, Jan M.W. Geurts, Roeland M. H. Merks
7citations -
Proton pump inhibitors and gut microbiota dysbiosis: insights into the pathogenesis of ulcerative colitis2025 Frontiers in Microbiology article Biochemistry, Genetics and Molecular Biology Gut microbiota and health Open access
Feng Cao, Shuo Liu, Yanwei Liu, Yong Xin Qi, Yunsheng Cheng, Yong Wang, +1 more
7citations -
Unraveling interindividual differences and functional consequences of gut microbial metabolism of immunosuppressants2024 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Gut microbiota and health Open access
Maral Baghai Arassi, Nicolai Karcher, Eleonora Mastrorilli, Matthias Groß, Amber Brauer-Nikonow, David Czock, +3 more
6citations