Papers in Microbial Metabolic Engineering and Bioproduction 248
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MEMOTE for standardized genome-scale metabolic model testing2020 Nature Biotechnology article Biochemistry, Genetics and Molecular Biology Microbial Metabolic Engineering and Bioproduction Open access
Christian Lieven, Moritz E. Beber, Brett G. Olivier, Frank Bergmann, Meriç Ataman, Parizad Babaei, +63 more
572citations -
Machine learning in bioprocess development: from promise to practice2022 Trends in biotechnology review Biochemistry, Genetics and Molecular Biology Microbial Metabolic Engineering and Bioproduction Open access cited by 1 patent
Laura M. Helleckes, Johannes Hemmerich, Wolfgang Wiechert, Eric von Lieres, Alexander Grünberger
166citations -
Advances in metabolic engineering of Corynebacterium glutamicum to produce high-value active ingredients for food, feed, human health, and well-being2021 Essays in Biochemistry article Biochemistry, Genetics and Molecular Biology Microbial Metabolic Engineering and Bioproduction Open access cited by 3 patents
Judith Becker, Yota Tsuge, Hideo Kawaguchi, Akihiko Kondo, Jan Marienhagen, Michael H. Bott, +2 more
133citations -
Engineering intracellular malonyl-CoA availability in microbial hosts and its impact on polyketide and fatty acid synthesis127citations
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Comparison of Three Xylose Pathways in Pseudomonas putida KT2440 for the Synthesis of Valuable Products2020 Frontiers in Bioengineering and Biotechnology article Biochemistry, Genetics and Molecular Biology Microbial Metabolic Engineering and Bioproduction Open access cited by 1 patent
Isabel Bator, Andreas Wittgens, Frank Rosenau, Till Tiso, Lars M. Blank
123citations -
Engineering and application of a biosensor with focused ligand specificity2020 Nature Communications article Biochemistry, Genetics and Molecular Biology Microbial Metabolic Engineering and Bioproduction Open access
Dennis Della Corte, Hugo L. van Beek, Falk Syberg, Marcus Schallmey, Felix Tobola, Kai U. Cormann, +9 more
110citations -
Fatty Acid and Alcohol Metabolism in Pseudomonas putida: Functional Analysis Using Random Barcode Transposon Sequencing2020 Applied and Environmental Microbiology article Biochemistry, Genetics and Molecular Biology Microbial Metabolic Engineering and Bioproduction Open access
Mitchell G. Thompson, Matthew R. Incha, Allison N. Pearson, Matthias Schmidt, William A. Sharpless, Christopher B. Eiben, +12 more
107citations -
Unraveling 1,4-Butanediol Metabolism in Pseudomonas putida KT24402020 Frontiers in Microbiology article Biochemistry, Genetics and Molecular Biology Microbial Metabolic Engineering and Bioproduction Open access
Wing‐Jin Li, Tanja Narančić, Shane T. Kenny, Paul-Joachim Niehoff, Kevin Edward O’Connor, Lars M. Blank, +1 more
99citations -
Mixed-Integer Optimization for Loopless Flux Distributions in Metabolic Networks2024 arXiv (Cornell University) preprint Biochemistry, Genetics and Molecular Biology Microbial Metabolic Engineering and Bioproduction Open access
João Dionísio, Tim Donkiewicz, Leon Eifler, Ambros Gleixner, Katrin Halbig, Ivo Hedtke, +9 more
89citations -
Engineering adipic acid metabolism in Pseudomonas putida2021 Metabolic Engineering article Biochemistry, Genetics and Molecular Biology Microbial Metabolic Engineering and Bioproduction Open access cited by 1 patent
Yannic Sebastian Ackermann, Wing‐Jin Li, Leonie Op de Hipt, Paul-Joachim Niehoff, William T. Casey, Tino Polen, +6 more
83citations -
An Optimized Ustilago maydis for Itaconic Acid Production at Maximal Theoretical Yield2020 Journal of Fungi article Biochemistry, Genetics and Molecular Biology Microbial Metabolic Engineering and Bioproduction Open access
Johanna Becker, Hamed Hosseinpour Tehrani, Philipp Ernst, Lars M. Blank, Nick J. P. Wierckx
72citations -
Yeast9: a consensus genome-scale metabolic model for S. cerevisiae curated by the community2024 Molecular Systems Biology article Biochemistry, Genetics and Molecular Biology Microbial Metabolic Engineering and Bioproduction Open access cited by 1 patent
Chengyu Zhang, Benjamín J. Sánchez, Feiran Li, Cheng Wei Quan Eiden, William Taussig Scott, Ulf W. Liebal, +9 more
62citations -
Investigating metabolic interactions in a microbial co-culture through integrated modelling and experiments2020 Computational and Structural Biotechnology Journal article Biochemistry, Genetics and Molecular Biology Microbial Metabolic Engineering and Bioproduction Open access
Aarthi Ravikrishnan, Lars M. Blank, Smita Srivastava, Karthik Raman
57citations -
Engineering a new-to-nature cascade for phosphate-dependent formate to formaldehyde conversion in vitro and in vivo2023 Nature Communications article Biochemistry, Genetics and Molecular Biology Microbial Metabolic Engineering and Bioproduction Open access cited by 2 patents
Maren Nattermann, Sebastian Wenk, Pascal Pfister, Hai He, Seung Hwan Lee, Witold G. Szymanski, +11 more
50citations -
Corrigendum: Multi-Omics Analysis of Fatty Alcohol Production in Engineered Yeasts Saccharomyces cerevisiae and Yarrowia lipolytica2021 Frontiers in Genetics erratum Biochemistry, Genetics and Molecular Biology Microbial Metabolic Engineering and Bioproduction Open access
Jonathan Dahlin, Carina Holkenbrink, Eko Roy Marella, Guokun Wang, Ulf W. Liebal, Christian Lieven, +7 more
48citations -
Synthesis of the character impact compound raspberry ketone and additional flavoring phenylbutanoids of biotechnological interest with Corynebacterium glutamicum45citations
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Maximizing Heterologous Expression of Engineered Type I Polyketide Synthases: Investigating Codon Optimization Strategies2023 ACS Synthetic Biology article Biochemistry, Genetics and Molecular Biology Microbial Metabolic Engineering and Bioproduction Open access
Matthias Schmidt, Namil Lee, Chunjun Zhan, Jacob B. Roberts, Alberto A. Nava, Leah S. Keiser, +6 more
43citations -
A new era of synthetic biology—microbial community design2024 Synthetic Biology article Biochemistry, Genetics and Molecular Biology Microbial Metabolic Engineering and Bioproduction Open access
Anna Matuszyńska, Oliver Ebenhöh, Matias Daniel Zurbriggen, Daniel C. Ducat, Ilka Maria IM Axmann
42citations -
bletl ‐ A Python package for integrating BioLector microcultivation devices in the Design‐Build‐Test‐Learn cycle2022 Engineering in Life Sciences software-paper Biochemistry, Genetics and Molecular Biology Microbial Metabolic Engineering and Bioproduction Open access
Michael Osthege, Niklas Tenhaef, Rebecca Zyla, Carolin Müller, Johannes Hemmerich, Wolfgang Wiechert, +2 more
42citations -
Engineering the methylotrophic yeast Ogataea polymorpha for lactate production from methanol2023 Frontiers in Bioengineering and Biotechnology article Biochemistry, Genetics and Molecular Biology Microbial Metabolic Engineering and Bioproduction Open access
Katrin Wefelmeier, Simone Schmitz, Ann M. Haut, Johannes Otten, Tobias Jülich, Lars M. Blank
41citations -
Synthetically-primed adaptation of Pseudomonas putida to a non-native substrate D-xylose2024 Nature Communications article Biochemistry, Genetics and Molecular Biology Microbial Metabolic Engineering and Bioproduction Open access
Pavel Dvořák, Barbora Burýšková, Barbora Popelářová, Birgitta E. Ebert, Tibor Botka, Dalimil Bujdoš, +6 more
40citations -
One‐shot 13C15N‐metabolic flux analysis for simultaneous quantification of carbon and nitrogen flux2023 Molecular Systems Biology article Biochemistry, Genetics and Molecular Biology Microbial Metabolic Engineering and Bioproduction Open access
Khushboo Borah, Martin Beyß, Ye Xu, Jim Barber, Catia Costa, Jane Newcombe, +5 more
38citations -
AutoBioTech─A Versatile Biofoundry for Automated Strain Engineering2024 ACS Synthetic Biology article Biochemistry, Genetics and Molecular Biology Microbial Metabolic Engineering and Bioproduction Open access
Tobias Michael Rosch, Julia Tenhaef, Till Redeker, Dominic Kösters, Niels Hollmann, Karin Krumbach, +5 more
36citations -
Three multi-enzyme cascade pathways for conversion of C1 to C2/C4 compounds2022 Chem Catalysis article Biochemistry, Genetics and Molecular Biology Microbial Metabolic Engineering and Bioproduction Open access
Junhui Zhou, Xinyu Tian, Qian Yang, Zixuan Zhang, Changjing Chen, Ziheng Cui, +4 more
35citations -
High-Quality Genome-Scale Reconstruction of Corynebacterium glutamicum ATCC 130322021 Frontiers in Microbiology article Biochemistry, Genetics and Molecular Biology Microbial Metabolic Engineering and Bioproduction Open access cited by 1 patent
Martina Feierabend, Alina Renz, Elisabeth Zelle, Katharina Nöh, Wolfgang Wiechert, Andreas Dräger
33citations