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Papers matching “transcriptomics” 421

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Spatial transcriptomics in the human adult ovary: insights into key signalling pathways during follicular atresia
2026 Human Reproduction article Medicine Reproductive Biology and Fertility Open access

Hanne Vlieghe, Fu Wei, Hui Cheng, Tessa H R Stolk, Judith A.F. Huirne, Norah M. van Mello, +2 more

2

citations
Single-cell spatial transcriptomics unravels cell states and ecosystems associated with clinical response to immunotherapy
2025 Journal for ImmunoTherapy of Cancer article Medicine Cancer Immunotherapy and Biomarkers Open access

Ziena Abdulrahman, Roderick C. Slieker, Daniel McGuire, Marij J.P. Welters, Mariëtte I.E. van Poelgeest, Sjoerd H. van der Burg

23

citations
Urine peptidome in combination with transcriptomics analysis highlights MMP7, MMP14 and PCSK5 for further investigation in chronic kidney disease
2022 PLoS ONE article Medicine Chronic Kidney Disease and Diabetes Open access

Eleni Petra, Justyna Siwy, Antonia Vlahou, Joachim Jankowski

25

citations
Spatially resolved transcriptomics of benign and malignant peripheral nerve sheath tumors
2025 Neuro-Oncology article Medicine Neurofibromatosis and Schwannoma Cases Open access

Juliane Bremer, Pamela Franco, Joelle Aline Menstell, Shelisa Tey, Kamil Kajetan Zajt, Klimentina Popzhelyazkova, +11 more

6

citations
D18-09 The Multiorgan Multicenter Spatial Transcriptomics Atlas Reveals Layered Granuloma Architecture and Cellular Programs Driving Sarcoidosis
2026 American Journal of Respiratory and Critical Care Medicine article Medicine Sarcoidosis and Beryllium Toxicity Research

Jannik Ruwisch, Leonard Christian, Stephan Traidl, J Dietrich, J-C Kamp, Janis Casper, +19 more

0

citations
A transcriptomics-driven quantitative adverse outcome pathway network model for gentamicin-induced nephrotoxicity
2026 Computational Toxicology article Medicine Acute Kidney Injury Research Open access

Filippo Di Tillio, Tianqi Zhang, Hugo W van Kessel, Steven J. Kunnen, Bob van de Water, Joost B. Beltman

1

citations
A Transcriptomics-Based Meta-Analysis Combined With Machine Learning Identifies a Secretory Biomarker Panel for Diagnosis of Pancreatic Adenocarcinoma
2020 Frontiers in Genetics article Medicine Pancreatic and Hepatic Oncology Research Open access

Indu Khatri, Manoj Bhasin

32

citations
Spatial transcriptomics uncovers hybrid, proinflammatory, and profibrotic cellular niches in pulmonary granuloma of patients with chronic sarcoidosis
2026 American Journal of Respiratory and Critical Care Medicine article Medicine Sarcoidosis and Beryllium Toxicity Research Open access

Leonard Christian, Hande Yilmaz, Jannik Ruwisch, Leon Giercke, Benjamin Seeliger, Jan C. Kamp, +19 more

5

citations
Spatial transcriptomics uncovers hybrid, proinflammatory, and profibrotic cellular niches in pulmonary granuloma of patients with chronic sarcoidosis
2026 American Journal of Respiratory and Critical Care Medicine article Medicine Sarcoidosis and Beryllium Toxicity Research Open access

Leonard Christian, Hande Yilmaz, Jannik Ruwisch, Leon Giercke, Benjamin Seeliger, Jan C. Kamp, +19 more

2

citations
Single-Cell Transcriptomics Analysis of Human Small Antral Follicles
2021 International Journal of Molecular Sciences article Medicine Reproductive Biology and Fertility Open access

Xueying Fan, Ioannis Moustakas, Monika Bialecka, Julieta S. del Valle, Arend W. Overeem, Leoni A. Louwé, +4 more

35

citations
Single-Cell Transcriptomics Links Loss of Human Pancreatic β-Cell Identity to ER Stress
2021 Cells article Medicine Pancreatic function and diabetes Open access

Nathalie Gröen, Floris Leenders, Ahmed Essam Mahfouz, Amadeo Munoz-Garcia, Mauro J. Muraro, Natascha de Graaf, +7 more

14

citations
Putative role of glial cells in treatment resistance depression: An updated critical literation review and evaluation of single-nuclei transcriptomics data
2023 Life Sciences article Medicine Treatment of Major Depression

Nima Sanadgol, Adib Miraki Feriz, Sabrina Francesca de Souza Lisboa, Sâmia R.L. Joca

8

citations
Nociception, Transcriptomics ET CETERA: NOCICEPTRA
2022 Pflügers Archiv - European Journal of Physiology article Medicine Pain Mechanisms and Treatments Open access

Natja Haag, Angelika Lampert

2

citations
44PHigh-resolution spatial transcriptomics reveals myofiber-immune cell interactions in inclusion body myositis
2025 Neuromuscular Disorders article Medicine Inflammatory Myopathies and Dermatomyositis

L. Heezen, Ahmed Essam Mahfouz, Hermien E. Kan, Umesh A. Badrising, Pietro Spitali

0

citations
Single-cell transcriptomics reveals a role for pancreatic duct cells as potential mediators of inflammation in diabetes mellitus
2024 Frontiers in Immunology article Medicine Pancreatic function and diabetes Open access

Amadeo Munoz-Garcia, Juri Juksar, Nathalie Gröen, Arnaud Zaldumbide, Eelco J.P. de Koning, Françoise Carlotti

13

citations
Multimodal analysis unveils tumor microenvironment heterogeneity linked to immune activity and evasion
2024 iScience article Medicine Cancer Immunotherapy and Biomarkers Open access

Óscar Lapuente-Santana, Gregor Sturm, J A Kant, Markus Außerhofer, Constantin Zackl, Maria Zopoglou, +6 more

16

citations
Molecular architecture of human dermal sleeping nociceptors
2026 Cell article Medicine Pain Mechanisms and Treatments Open access

Jannis Körner, Derek Howard, Hans Jürgen Solinski, Marisol Mancilla Moreno, Natja Haag, Andrea Fiebig, +23 more

24

citations
Patient-derived resources for decoding and targeting brain metastases ecosystems
2026 EMBO Molecular Medicine article Medicine Brain Metastases and Treatment Open access

Manuel Valiente, Lal Era Aydoğan, Nisan Feigin, Clara Gahn, Carolina Hernández-Oliver, Friedrich Milling, +19 more

0

citations
T-cell dysfunction in the glioblastoma microenvironment is mediated by myeloid cells releasing interleukin-10
2022 Nature Communications article Medicine Cancer Immunotherapy and Biomarkers Open access

Vidhya Madapusi Ravi, Nicolas Noel Neidert, Paulina Will, Kevin Joseph, Julian P. Maier, Jan Kückelhaus, +22 more

371

citations
Secondary integrated analysis of multi-tissue transcriptomic responses to a combined lifestyle intervention in older adults from the GOTO nonrandomized trial
2024 Nature Communications article Medicine Adipose Tissue and Metabolism Open access

Fatih A. Bogaards, Thies Gehrmann, Marian Beekman, Nico Lakenberg, H. Eka D. Suchiman, C.P.G.M. de Groot, +2 more

8

citations
Whole blood co-expression modules associate with metabolic traits and type 2 diabetes: an IMI-DIRECT study
2020 Genome Medicine article Medicine Adipokines, Inflammation, and Metabolic Diseases Open access

Valborg Guðmundsdóttir, Helle Pedersen, Gianluca Mazzoni, Kristine Højgaard Allin, Anna Artati, Joline W. J. Beulens, +49 more

14

citations
Impaired Metabolic Remodeling Characterizes Injured Niches during Post-ischemic Kidney Repair
2026 Journal of the American Society of Nephrology article Medicine Acute Kidney Injury Research Open access

Rosalie G. J. Rietjens, Benedetta Manzato, Yuheng Liao, Ahmed Essam Mahfouz, Martin A. Giera, Bernard M. van den Berg, +3 more

0

citations
P02.14.B SPATIAL TRANSCRIPTOMIC ARCHITECTURE OF TUMOURS OF THE PERIPHERAL NERVOUS SYSTEM
2023 Neuro-Oncology article Medicine Neurofibromatosis and Schwannoma Cases Open access

Pamela Heiland, Joelle Aline Menstell, Oliver Schnell, Jürgen Beck, Juliane Bremer, Dieter Henrik Heiland

0

citations
Mapping of mitogen and metabolic sensitivity in organoids defines requirements for human hepatocyte growth
2024 Nature Communications article Medicine Liver physiology and pathology Open access

Delilah F. G. Hendriks, Benedetta Artegiani, Thanasis Margaritis, Iris Zoutendijk, Susana M. Chuva de Sousa Lopes, Hans C. Clevers

38

citations
Multiomic profiling of transplant glomerulopathy reveals a novel T-cell dominant subclass
2023 Kidney International article Medicine Renal Transplantation Outcomes and Treatments Open access

Iacopo Cristoferi, Hilal Varol, Myrthe van Baardwijk, Layla Rahiem, Karishma A. Lila, Thierry P. P. van den Bosch, +13 more

34

citations