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Encompassing view of spatial and single-cell RNA sequencing renews the role of the microvasculature in human atherosclerosis2024 Nature Cardiovascular Research article Immunology and Microbiology Atherosclerosis and Cardiovascular Diseases Open access
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Enhanced fatty acid oxidation through metformin and baicalin as therapy for COVID-19 and associated inflammatory states in lung and kidney2023 Redox Biology article Biochemistry, Genetics and Molecular Biology Metabolism, Diabetes, and Cancer Open access
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In vivo expression of VCAM1 precedes nephron loss following kidney tubular necrosis2025 Science Advances article Biochemistry, Genetics and Molecular Biology Renal and related cancers Open access
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Encompassing view of spatial and single-cell RNA-seq renews the role of the microvasculature in human atherosclerosis2023 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
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Borderline (suspicious) for T-cell-mediated rejection, the Banff classification's Achilles’ heel2024 Nephrology Dialysis Transplantation article Medicine Renal Transplantation Outcomes and Treatments Open access
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Rethinking the Diagnosis and Management of Antibody‐Mediated Rejection in Multidisciplinary Transplant Meetings: A Global Survey and Banff Working Group Recommendations2025 Clinical Transplantation article Medicine Renal Transplantation Outcomes and Treatments Open access
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Normothermic versus hypothermic machine perfusion in kidney transplantation: A randomized controlled trial2025 American Journal of Transplantation article Medicine Organ Transplantation Techniques and Outcomes Open access
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SwarmMAP: Swarm Learning for Decentralized Cell Type Annotation in Single Cell Sequencing Data2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
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Integrative single-cell and genetic profiling of human heart failure identifies targets for cardiomyocyte restoration2025 medRxiv preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
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Deletion of RFX6, a Diabetes-Associated Gene, Impairs iPSC-Derived Islet Organoid Development and Survival, With No Impact on the Generation of PDX1+/NKX6.1+ Progenitors2024 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine Pancreatic function and diabetes Open access
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scDecorr - Feature decorrelation representation learning with domain adaptation enables self-supervised alignment of multiple single-cell experiments0citations
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A High Content Imaging and Machine Learning Approach to Identify the Anti-Cancer Effect of Novel Small Molecules on Brain Cancer Patient-Derived Organoids2025 Microscopy and Microanalysis article Biochemistry, Genetics and Molecular Biology Cell Image Analysis Techniques Open access
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SwarmMAP: swarm learning for decentralized cell type annotation in single cell sequencing data2026 npj Systems Biology and Applications article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Oliver Lester Saldanha, Vivien Goepp, Hyojin Kim, Jie Fu Zhu, Rafael Kramann, Sikander Hayat, +1 more
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scDecorr: feature decorrelation based representation learning enables self-supervised alignment of multiple single-cell experiments2026 Scientific Reports article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
Ritabrata Sanyal, Yang Xu, Hyojin Kim, Rafael Kramann, Sikander Hayat
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The density of tumour infiltrating lymphocytes in oesophago-gastric cancer varies with disease stage, geographical region and treatment: a post hoc analysis of nine phase III clinical trials
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Deep Visual Proteomics links vascular smooth muscle cell phenotypes to atherosclerotic plaque stability2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access
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