linkml/schema-automator: v0.5.5-rc1

Zenodo (CERN European Organization for Nuclear Research)

Abstract

What's Changed New feature: --infer-enum-from-integers flag for low-cardinality integer enum detection (#188, @Sigfried) Bug fixes: Fix import_kwalify CLI passing wrong args to convert(), fix stray w expression in TomlDataGeneralizer.convert() that would crash at runtime Imports: Replace eager import * with lazy PEP 562 __getattr__ — import schema_automator drops from ~0.75s to ~0.03s. Complete public API exports (added 5 missing importers, 2 missing generalizers). Fix circular imports in pandas_generalizer.py and toml_instance_generalizer.py. Dependency cleanup: Remove unused deprecation and numpy deps, fix misplaced deptry, remove duplicate lxml entry Remove stale Docker support: Dockerfile, Makefile targets, install docs (see #197) CI fix: Per-version venv cache, update numpy/lxml for Python 3.13+3.14 (#189)

Authors 16

1. Chris J Mungall

   Lawrence Berkeley National Laboratory

   Affiliation as printed

   Lawrence Berkeley National Laboratory

2. Sierra Moxon

   Lawrence Berkeley National Laboratory

   Affiliation as printed

   Lawrence Berkeley National Lab

3. Michael
4. Corey Cox
5. Harshad
6. Patrick Golden

   University of North Carolina at Chapel Hill

   Affiliation as printed

   UNC Chapel Hill

7. Charles Tapley Hoyt Aachen

   RWTH Aachen University

   Affiliation as printed

   RWTH Aachen University

8. David Linke

   Leibniz Institute for Catalysis

   Affiliation as printed

   Leibniz Institute for Catalysis (LIKAT)

9. Nicolas Matentzoglu
   Affiliation as printed

   semanticly.ai

10. Nomi L. Harris

    Lawrence Berkeley National Laboratory

    Affiliation as printed

    Lawrence Berkeley National Laboratory

11. Sigfried Gold
12. Trish Whetzel
13. Yaroslav O. Halchenko

    Dartmouth College

    Affiliation as printed

    Dartmouth College, @dandi, @Debian, @DataLad, @neurodebian, @PyMVPA, @fail2ban

14. epstein6
15. N
16. wb0206