September 01, 2025 article Open access Biophysics-based protein language models for protein engineering Nature Methods DOI: 10.1038/s41592-025-02776-2 Full text (OA) OpenAlex Authors 0 Author list not loaded yet. Cited by 0 stored of 68 References 3 Search Sort Most cited Newest Oldest Patent citations Title Any typearticle review book-chapter conference-paper preprint dissertation book dataset other Any fieldAgricultural and Biological Sciences Arts and Humanities Biochemistry, Genetics and Molecular Biology Business, Management and Accounting Chemical Engineering Chemistry Computer Science Decision Sciences Dentistry Earth and Planetary Sciences Economics, Econometrics and Finance Energy Engineering Environmental Science Health Professions Immunology and Microbiology Materials Science Mathematics Medicine Neuroscience Nursing Pharmacology, Toxicology and Pharmaceutics Physics and Astronomy Psychology Social Sciences Veterinary Open access Combinatorial assembly and design of enzymes 2023 Science article Biochemistry, Genetics and Molecular Biology Protein Structure and Dynamics Open access 79 citations A hybrid model combining evolutionary probability and machine learning leverages data-driven protein engineering 2022 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Protein Structure and Dynamics Open access 11 citations TransMEP: Transfer learning on large protein language models to predict mutation effects of proteins from a small known dataset 2024 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Machine Learning in Bioinformatics Open access 7 citations 3 results