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A decision-making framework to maximise the evolutionary potential of populations - Genetic and genomic insights from the common midwife toad (Alytes obstetricans) at its range limits

Heredity, vol. 133, pp. 249–261

Abstract

Anthropogenic habitat modification and climate change are fundamental drivers of biodiversity declines, reducing the evolutionary potential of species, particularly at their distributional limits. Supportive breeding or reintroductions of individuals are often made to replenish declining populations, sometimes informed by genetic analysis. However, most approaches utilised (i.e. single locus markers) do not have the resolution to account for local adaptation to environmental conditions, a crucial aspect to consider when selecting donor and recipient populations. Here, we incorporate genetic (microsatellite) and genome-wide SNP (ddRAD-seq) markers, accounting for both neutral and putative adaptive genetic diversity, to inform the conservation management of the threatened common midwife toad, Alytes obstetricans at the northern and eastern edges of its range in Europe. We find geographically structured populations (n = 4), weak genetic differentiation and fairly consistent levels of genetic diversity across localities (observed heterozygosity and allelic richness). Categorising individuals based on putatively adaptive regions of the genome showed that the majority of localities are not strongly locally adapted. However, several localities present high numbers of private alleles in tandem with local adaptation to warmer conditions and rough topography. Combining genetic diversity and local adaptations with estimates of migration rates, we develop a decision-making framework for selecting donor and recipient populations which maximises the geographic dispersal of neutral and putatively adaptive genetic diversity. Our framework is generally applicable to any species, but especially to amphibians, so armed with this information, conservationists may avoid the reintroduction of unsuitable/maladapted individuals to new sites and increase the evolutionary potential of populations within species.

Authors 6

  1. Naturalis Biodiversity Center · German Centre for Integrative Biodiversity Research · Wageningen University & Research · Leipzig University

    Affiliation as printed

    Animal Breeding and Genomics, Wageningen University & Research, Droevendaalsesteeg 1, 6708 PB, Wageningen, The Netherlands. c.d.barratt@gmail.com

    German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Puschstrasse 4, 04103, Leipzig, Germany. c.d.barratt@gmail.com

    Naturalis Biodiversity Center, Darwinweg 2, 2333 CR, Leiden, The Netherlands. c.d.barratt@gmail.com

    University of Leipzig, Ritterstrasse 26, 04109, Leipzig, Germany. c.d.barratt@gmail.com

    German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Puschstrasse 4, 04103, Leipzig, Germany

  2. Leipzig University

    Affiliation as printed

    University of Leipzig, Institute of Biology, Molecular Evolution and Systematics of Animals, Talstrasse 33, 04103, Leipzig, Germany

  3. Leipzig University

    Affiliation as printed

    University of Leipzig, Institute of Biology, Molecular Evolution and Systematics of Animals, Talstrasse 33, 04103, Leipzig, Germany

  4. Nature And Biodiversity Conservation Union

    Affiliation as printed

    NABU (Nature and Biodiversity Conservation Union) Lower Saxony, Alleestrasse 36, 30167, Hannover, Germany

  5. Nature And Biodiversity Conservation Union

    Affiliation as printed

    NABU (Nature and Biodiversity Conservation Union) Lower Saxony, Alleestrasse 36, 30167, Hannover, Germany

  6. Sebastian Steinfartz corresponding

    Leipzig University

    Affiliation as printed

    University of Leipzig, Institute of Biology, Molecular Evolution and Systematics of Animals, Talstrasse 33, 04103, Leipzig, Germany. steinfartz@uni-leipzig.de

    University of Leipzig, Institute of Biology, Molecular Evolution and Systematics of Animals, Talstrasse 33, 04103, Leipzig, Germany

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References 64