ATR phosphoproteomics

Zenodo (CERN European Organization for Nuclear Research)

Abstract

R scripts used in the publication for the analysis of the phospho-proteomics dataset.

Authors 18

1. Rathan S Jadav

   University of Dundee · MRC Protein Phosphorylation and Ubiquitylation Unit

   Affiliation as printed

   MRC Protein Phosphorylation and Ubiquitylation Unit, School of Life Sciences, University of Dundee, Dundee, UK

2. Florian Weiland

   University of Dundee · MRC Protein Phosphorylation and Ubiquitylation Unit

   Affiliation as printed

   MRC Protein Phosphorylation and Ubiquitylation Unit, School of Life Sciences, University of Dundee, Dundee, UK; Department of Microbial and Molecular Systems (M2S), Centre for Food and Microbial Technology (CLMT), Laboratory of Enzyme, Fermentation and Brewing Technology (EFBT), Technology Campus Ghent, Ghent, Belgium

3. Thomas D. Carroll

   University of Dundee · MRC Protein Phosphorylation and Ubiquitylation Unit

   Affiliation as printed

   MRC Protein Phosphorylation and Ubiquitylation Unit, School of Life Sciences, University of Dundee, Dundee, UK

4. Yuandi Gao

   Université Laval · Centre de recherche du CHU de Québec-Université Laval

   Affiliation as printed

   CHU de Quebec Research Center,Oncology Division, Dept. of Molecular Biology, Medical Biochemistry and Pathology, Laval University Cancer Research Center, 9 McMahon Drive, Quebec Cit, QC G1R 3S3, Canada

5. Jianming Wang

   University of Dundee · MRC Protein Phosphorylation and Ubiquitylation Unit

   Affiliation as printed

   MRC Protein Phosphorylation and Ubiquitylation Unit, School of Life Sciences, University of Dundee, Dundee, UK

6. Houjiang Zhou

   University of Dundee · MRC Protein Phosphorylation and Ubiquitylation Unit · Zhejiang Hisun Pharmaceutical (China)

   Affiliation as printed

   MRC Protein Phosphorylation and Ubiquitylation Unit, School of Life Sciences, University of Dundee, Dundee, UK; HISUN Research Institute, Zhejiang HISUN Pharmaceutical Co. Ltd, 46 Waisha Rd., Taizhou City, Zhejiang Province, China

   MRC Protein Phosphorylation and Ubiquitylation Unit, School of Life Sciences, University of Dundee, Dundee, UK; HISUN Research Institute, Zhejiang HISUN Pharmaceutical Co. Ltd, 46 Waisha Rd., Taizhou City, Zhejiang Province, China

7. Frédéric Lamoliatte

   University of Dundee · MRC Protein Phosphorylation and Ubiquitylation Unit

   Affiliation as printed

   MRC Protein Phosphorylation and Ubiquitylation Unit, School of Life Sciences, University of Dundee, Dundee, UK

8. Ivan M. Munoz

   University of Dundee · MRC Protein Phosphorylation and Ubiquitylation Unit

   Affiliation as printed

   MRC Protein Phosphorylation and Ubiquitylation Unit, School of Life Sciences, University of Dundee, Dundee, UK

9. Rachel L. Toth

   University of Dundee · MRC Protein Phosphorylation and Ubiquitylation Unit

   Affiliation as printed

   MRC Protein Phosphorylation and Ubiquitylation Unit, School of Life Sciences, University of Dundee, Dundee, UK

10. Thomas Macartney

    University of Dundee · MRC Protein Phosphorylation and Ubiquitylation Unit

    Affiliation as printed

    MRC Protein Phosphorylation and Ubiquitylation Unit, School of Life Sciences, University of Dundee, Dundee, UK

11. Haico van Attikum Aachen Department of Human Genetics

    Leiden University Medical Center

    Affiliation as printed

    Dept of Human Genetics, Leiden University Medical Center, Einthovenweg 20, 2333 ZC Leiden, Netherlands

    Dept of Human Genetics, Leiden University Medical Center, Einthovenweg 20, 2333 ZC  Leiden, Netherlands

12. Fiona Brown

    University of Dundee · MRC Protein Phosphorylation and Ubiquitylation Unit

    Affiliation as printed

    MRC Protein Phosphorylation and Ubiquitylation Unit, School of Life Sciences, University of Dundee, Dundee, UK

13. C. James Hastie

    University of Dundee · MRC Protein Phosphorylation and Ubiquitylation Unit

    Affiliation as printed

    MRC Protein Phosphorylation and Ubiquitylation Unit, School of Life Sciences, University of Dundee, Dundee, UK

14. Constance Alabert

    University of Dundee

    Affiliation as printed

    Division of Molecular, Cell and Developmental Biology, School of Life Sciences, Wellcome Trust Biocentre, University of Dundee, DD1 5EH, UK

15. Frank T. Zenke

    Merck Healthcare KGaA, Darmstadt (Germany)

    Affiliation as printed

    EMD Serono, Research Unit Oncology, EMD Serono, Billerica, MA, USA

16. Sylvie M. Noordermeer Aachen Department of Human Genetics

    Leiden University Medical Center · Oncode Institute

    Affiliation as printed

    Dept of Human Genetics, Leiden University Medical Center, Einthovenweg 20, 2333 ZC Leiden, Netherlands, Oncode Iinstitute, Utrecht, The Netherlands

    Dept of Human Genetics, Leiden University Medical Center, Einthovenweg 20, 2333 ZC  Leiden, Netherlands, Oncode Iinstitute, Utrecht, The Netherlands

17. Jean‐Yves Masson

    Université Laval · Centre de recherche du CHU de Québec-Université Laval

    Affiliation as printed

    CHU de Quebec Research Center,Oncology Division, Dept. of Molecular Biology, Medical Biochemistry and Pathology, Laval University Cancer Research Center, 9 McMahon Drive, Quebec Cit, QC G1R 3S3, Canada

18. John Wilson Rouse

    University of Dundee · MRC Protein Phosphorylation and Ubiquitylation Unit

    Affiliation as printed

    MRC Protein Phosphorylation and Ubiquitylation Unit, School of Life Sciences, University of Dundee, Dundee, UK