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Combinatorial T cell engineering eliminates on-target off-tumor toxicity of CD229 CAR T cells while maintaining anti-tumor activity

bioRxiv (Cold Spring Harbor Laboratory)

Abstract

ABSTRACT T cells expressing chimeric antigen receptors have shown remarkable therapeutic activity against different types of cancer. However, their wider use has been hampered by the potential for life-threatening toxicities due to the unintended targeting of healthy cells expressing low levels of the targeted antigen. We have now developed an affinity-tuning approach for the generation of minimally modified, low-affinity antibody variants derived from existing high-affinity antibodies. Using this approach, we engineered low affinity variants of the fully human CD229-specific antibody 2D3. Parental 2D3 originally efficiently targeted multiple myeloma cells but also healthy T cells expressing low levels of CD229. We demonstrate that CAR T cells based on a low affinity variant of 2D3, engineered to also express CJUN to increase CAR T cell expansion, maintain the parental antibody’s anti-tumor activity but lack its targeting of healthy T cells in vitro and in vivo . In addition, we found that low affinity CD229 CAR T cells show reduced trogocytosis potentially augmenting CAR T cell persistence. The fast off-rate CAR produced using our affinity tuning approach eliminates a key liability of CD229 CAR T cells and paves the way for the effective and safe treatment of patients with multiple myeloma and other lymphoid malignancies. One sentence summary Rational T cell engineering yields low affinity CD229 CAR T cells overexpressing CJUN, which maintain the parental cells’ anti-tumor activity but eliminate killing of healthy T cells, increasing CAR T cell expansion, and decreasing trogocytosis.

Authors 13

  1. University of Maryland, Baltimore · University of Utah · Huntsman Cancer Institute

    Affiliation as printed

    Department of Microbiology and Immunology, University of Maryland School of Medicine, Baltimore, MD, United States

    Department of Pharmaceutics & Pharmaceutical Chemistry, University of Utah, Salt Lake City, UT, United States

    Hematology and Hematologic Malignancies, Huntsman Cancer Institute, University of Utah, Salt Lake City, UT, United States

    Department of Microbiology and Immunology, University of Maryland School of Medicine

    Department of Pharmaceutics & Pharmaceutical Chemistry, University of Utah

    Hematology and Hematologic Malignancies, Huntsman Cancer Institute, University of Utah

  2. University of Maryland, Baltimore

    Affiliation as printed

    Department of Microbiology and Immunology, University of Maryland School of Medicine, Baltimore, MD, United States

    Department of Microbiology and Immunology, University of Maryland School of Medicine

  3. Medical College of Wisconsin · University of Utah · Huntsman Cancer Institute

    Affiliation as printed

    Division of Hematology and Oncology, Medical College of Wisconsin, Milwaukee, USA

    Hematology and Hematologic Malignancies, Huntsman Cancer Institute, University of Utah, Salt Lake City, UT, United States

    Division of Hematology and Oncology, Medical College of Wisconsin

    Hematology and Hematologic Malignancies, Huntsman Cancer Institute, University of Utah

  4. University of Maryland, Baltimore · University of Maryland Marlene and Stewart Greenebaum Comprehensive Cancer Center

    Affiliation as printed

    Department of Medicine and Transplant/Cell Therapy Program, University of Maryland School of Medicine and Marlene and Stewart Greenebaum Comprehensive Cancer Center, Baltimore, MD, United States

    Department of Medicine and Transplant/Cell Therapy Program, University of Maryland School of Medicine and Marlene and Stewart Greenebaum Comprehensive Cancer Center

  5. University of Utah · ARUP Laboratories (United States)

    Affiliation as printed

    Department of Pathology, University of Utah, Salt Lake City, UT, United States

    Division of Experimental and Clinical Pathology, ARUP Laboratories, Salt Lake City, USA

    Department of Pathology, University of Utah

    Division of Experimental and Clinical Pathology

  6. Universitätsklinikum Aachen · RWTH Aachen University

    Affiliation as printed

    Department of Oncology, Hematology, Hemostaseology, and Stem Cell Transplantation, University Hospital RWTH Aachen, Aachen, Germany

    Department of Oncology, Hematology, Hemostaseology, and Stem Cell Transplantation, University Hospital RWTH Aachen

  7. Huntsman Cancer Institute

    Affiliation as printed

    Huntsman Cancer Institute, University of Utah, Salt Lake City, UT, United States

    Huntsman Cancer Institute, University of Utah

  8. University of Utah

    Affiliation as printed

    Department of Pathology, University of Utah, Salt Lake City, UT, United States

    Department of Pathology, University of Utah

  9. University of Utah · Huntsman Cancer Institute

    Affiliation as printed

    Hematology and Hematologic Malignancies, Huntsman Cancer Institute, University of Utah, Salt Lake City, UT, United States

    Hematology and Hematologic Malignancies, Huntsman Cancer Institute, University of Utah

  10. University of Utah

    Affiliation as printed

    Department of Pathology, University of Utah, Salt Lake City, UT, United States

    Department of Pathology, University of Utah

  11. University of Utah

    Affiliation as printed

    Department of Pharmaceutics & Pharmaceutical Chemistry, University of Utah, Salt Lake City, UT, United States

    Department of Pharmaceutics & Pharmaceutical Chemistry, University of Utah

  12. University of Maryland, Baltimore · University of Maryland Marlene and Stewart Greenebaum Comprehensive Cancer Center

    Affiliation as printed

    Department of Medicine and Transplant/Cell Therapy Program, University of Maryland School of Medicine and Marlene and Stewart Greenebaum Comprehensive Cancer Center, Baltimore, MD, United States

    Department of Microbiology and Immunology, University of Maryland School of Medicine, Baltimore, MD, United States

    Department of Medicine and Transplant/Cell Therapy Program, University of Maryland School of Medicine and Marlene and Stewart Greenebaum Comprehensive Cancer Center

    Department of Microbiology and Immunology, University of Maryland School of Medicine

  13. Tim Luetkens corresponding

    University of Maryland, Baltimore · University of Utah · Huntsman Cancer Institute · University of Maryland Marlene and Stewart Greenebaum Comprehensive Cancer Center

    Affiliation as printed

    Department of Medicine and Transplant/Cell Therapy Program, University of Maryland School of Medicine and Marlene and Stewart Greenebaum Comprehensive Cancer Center, Baltimore, MD, United States

    Department of Microbiology and Immunology, University of Maryland School of Medicine, Baltimore, MD, United States

    Hematology and Hematologic Malignancies, Huntsman Cancer Institute, University of Utah, Salt Lake City, UT, United States

    Department of Medicine and Transplant/Cell Therapy Program, University of Maryland School of Medicine and Marlene and Stewart Greenebaum Comprehensive Cancer Center

    Department of Microbiology and Immunology, University of Maryland School of Medicine

    Hematology and Hematologic Malignancies, Huntsman Cancer Institute, University of Utah

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References 37