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KCND2 variants associated with global developmental delay differentially impair Kv4.2 channel gating

Human Molecular Genetics, vol. 30, pp. 2300–2314

Abstract

Here, we report on six unrelated individuals, all presenting with early-onset global developmental delay, associated with impaired motor, speech and cognitive development, partly with developmental epileptic encephalopathy and physical dysmorphisms. All individuals carry heterozygous missense variants of KCND2, which encodes the voltage-gated potassium (Kv) channel α-subunit Kv4.2. The amino acid substitutions associated with the variants, p.(Glu323Lys) (E323K), p.(Pro403Ala) (P403A), p.(Val404Leu) (V404L) and p.(Val404Met) (V404M), affect sites known to be critical for channel gating. To unravel their likely pathogenicity, recombinant mutant channels were studied in the absence and presence of auxiliary β-subunits under two-electrode voltage clamp in Xenopus oocytes. All channel mutants exhibited slowed and incomplete macroscopic inactivation, and the P403A variant in addition slowed activation. Co-expression of KChIP2 or DPP6 augmented the functional expression of both wild-type and mutant channels; however, the auxiliary β-subunit-mediated gating modifications differed from wild type and among mutants. To simulate the putative setting in the affected individuals, heteromeric Kv4.2 channels (wild type + mutant) were studied as ternary complexes (containing both KChIP2 and DPP6). In the heteromeric ternary configuration, the E323K variant exhibited only marginal functional alterations compared to homomeric wild-type ternary, compatible with mild loss-of-function. By contrast, the P403A, V404L and V404M variants displayed strong gating impairment in the heteromeric ternary configuration, compatible with loss-of-function or gain-of-function. Our results support the etiological involvement of Kv4.2 channel gating impairment in early-onset monogenic global developmental delay. In addition, they suggest that gain-of-function mechanisms associated with a substitution of V404 increase epileptic seizure susceptibility.

Authors 22

  1. University Medical Center Hamburg-Eppendorf

    Affiliation as printed

    Center for Experimental Medicine, Institute for Cellular and Integrative Physiology, University Hospital Hamburg-Eppendorf, 20246 Hamburg, Germany

  2. University Medical Center Hamburg-Eppendorf

    Affiliation as printed

    Institute for Human Genetics, University Hospital Hamburg-Eppendorf, 20246 Hamburg, Germany

  3. Hertie Institute for Clinical Brain Research · University of Tübingen

    Affiliation as printed

    Department of Neurology and Epileptology, Hertie-Institute for Clinical Brain Research, University of Tübingen, 72076 Tübingen, Germany

  4. Hertie Institute for Clinical Brain Research · University of Tübingen

    Affiliation as printed

    Department of Neurology and Epileptology, Hertie-Institute for Clinical Brain Research, University of Tübingen, 72076 Tübingen, Germany

  5. Hertie Institute for Clinical Brain Research · University of Tübingen

    Affiliation as printed

    Department of Neurology and Epileptology, Hertie-Institute for Clinical Brain Research, University of Tübingen, 72076 Tübingen, Germany

  6. University Hospital Leipzig · Leipzig University

    Affiliation as printed

    Center for Rare Diseases, University of Leipzig Medical Center, 04103 Leipzig, Germany

    Institute of Human Genetics, University of Leipzig Medical Center, 04103 Leipzig, Germany

  7. Leiden University Medical Center

    Affiliation as printed

    Department of Clinical Genetics, Leiden University Medical Center, 2333 Leiden, The Netherlands

  8. Leiden University Medical Center

    Affiliation as printed

    Department of Clinical Genetics, Leiden University Medical Center, 2333 Leiden, The Netherlands

  9. Telemark Hospital

    Affiliation as printed

    Department of Medical Genetics, Telemark Hospital Trust, 3710 Skien, Norway

  10. Telemark Hospital

    Affiliation as printed

    Department of Medical Genetics, Telemark Hospital Trust, 3710 Skien, Norway

  11. Hospital of Southern Norway · Sørlandet Hospital Arendal

    Affiliation as printed

    Department of Child Neurology and Rehabilitation, Hospital of Southern Norway, 4838 Arendal, Norway

    Department of Pediatrics, Hospital of Southern Norway, 4838 Arendal, Norway

  12. Phoenix Children's Hospital

    Affiliation as printed

    Division of Genetics & Metabolism, Phoenix Children’s Medical Group, Phoenix, AZ 85016, USA

    Division of Genetics & Metabolism, Phoenix Children's Medical Group, Phoenix, AZ 85016, USA

  13. Broad Institute · Massachusetts Institute of Technology

    Affiliation as printed

    Center for Mendelian Genomics and Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA

  14. Broad Institute · Massachusetts Institute of Technology

    Affiliation as printed

    Center for Mendelian Genomics and Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA

  15. Broad Institute · Massachusetts Institute of Technology

    Affiliation as printed

    Center for Mendelian Genomics and Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA

  16. Invitae (United States)

    Affiliation as printed

    Invitae Corporation, San Francisco, CA 94103, USA

  17. University Hospital Cologne

    Affiliation as printed

    Institute of Human Genetics, University Hospital of Cologne, 50931 Cologne, Germany

    Senckenberg Centre for Human Genetics, 60314 Frankfurt/Main, Germany

  18. University Medical Center of the Johannes Gutenberg University Mainz

    Affiliation as printed

    Institute of Human Genetics, University Medical Center Mainz, 55131 Mainz, Germany

    Senckenberg Centre for Human Genetics, 60314 Frankfurt/Main, Germany

  19. Northwestern University · Lurie Children's Hospital

    Affiliation as printed

    Department of Pediatrics, Ann & Robert H. Lurie Children’s Hospital of Chicago, Northwestern University Feinberg School of Medicine, Chicago, IL 60611, USA

    Department of Pediatrics, Ann & Robert H. Lurie Children's Hospital of Chicago, Northwestern University Feinberg School of Medicine, Chicago, IL 60611, USA

  20. Northwestern University · Lurie Children's Hospital

    Affiliation as printed

    Department of Pediatrics, Ann & Robert H. Lurie Children’s Hospital of Chicago, Northwestern University Feinberg School of Medicine, Chicago, IL 60611, USA

    Department of Pediatrics, Ann & Robert H. Lurie Children's Hospital of Chicago, Northwestern University Feinberg School of Medicine, Chicago, IL 60611, USA

  21. University Medical Center Hamburg-Eppendorf

    Affiliation as printed

    Institute for Human Genetics, University Hospital Hamburg-Eppendorf, 20246 Hamburg, Germany

  22. Robert Bähring corresponding

    University Medical Center Hamburg-Eppendorf

    Affiliation as printed

    Center for Experimental Medicine, Institute for Cellular and Integrative Physiology, University Hospital Hamburg-Eppendorf, 20246 Hamburg, Germany

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References 65