NanoPack: visualizing and processing long-read sequencing data

• Parallel Analysis of Repeat Expansions

  2026 Journal of Molecular Diagnostics article Neuroscience Genetic Neurodegenerative Diseases Open access

  0

  citations
• Functional redundancy and stability support the resilience of the Evernia prunastri holobiont under urbanization

  2026 Environmental Microbiome article Agricultural and Biological Sciences Lichen and fungal ecology Open access

  2

  citations
• On the status of Nomiapis valga (Gerstäcker) and its distribution (Hymenoptera, Halictidae, Nomiinae), with an identification key for European Nomiapis

  2025 Deutsche Entomologische Zeitschrift article Agricultural and Biological Sciences Hymenoptera taxonomy and phylogeny Open access

  1

  citations
• Unveiling the ecological processes driving soil and lichen microbiome assembly along an urbanization gradient

  2025 npj Biofilms and Microbiomes article Environmental Science Microbial Community Ecology and Physiology Open access

  9

  citations
• Enhancing metabarcoding efficiency and ecological insights through integrated taxonomy and DNA reference barcoding: A case study on beach meiofauna

  2024 Molecular Ecology Resources article Environmental Science Environmental DNA in Biodiversity Studies Open access

  22

  citations
• Enhancing metabarcoding efficiency and ecological insights through integrated taxonomy and DNA reference barcoding: a case study on beach meiofauna

  2024 bioRxiv (Cold Spring Harbor Laboratory) preprint Environmental Science Environmental DNA in Biodiversity Studies Open access

  3

  citations
• Refining the transcriptional landscapes for distinct clades of virulent phages infecting Pseudomonas aeruginosa

  2024 microLife article Environmental Science Bacteriophages and microbial interactions Open access

  13

  citations
• Refining the transcriptional landscapes for distinct clades of virulent phages infecting pseudomonas aeruginosa

  2023 bioRxiv (Cold Spring Harbor Laboratory) preprint Environmental Science Bacteriophages and microbial interactions Open access

  1

  citations
• Symmetric expression of ohnologs encoding conserved antiviral responses in tetraploid common carp suggest absence of subgenome dominance after whole genome duplication

  2023 Genomics article Agricultural and Biological Sciences Chromosomal and Genetic Variations Open access

  9

  citations
• Genomic diversity and metabolic potential of marine Pseudomonadaceae

  2023 Frontiers in Microbiology article Environmental Science Microbial Community Ecology and Physiology Open access cited by 1 patent

  21

  citations
• The genetic mechanisms underlying the convergent evolution of pollination syndromes in the Neotropical radiation of Costus L.

  2022 Frontiers in Plant Science article Agricultural and Biological Sciences Plant Diversity and Evolution Open access

  16

  citations
• The Ever-Expanding Pseudomonas Genus: Description of 43 New Species and Partition of the Pseudomonas putida Group

  2021 Microorganisms article Biochemistry, Genetics and Molecular Biology Genomics and Phylogenetic Studies Open access cited by 4 patents

  181

  citations
• Genomics of an endemic cystic fibrosis Burkholderia multivorans strain reveals low within-patient evolution but high between-patient diversity

  2021 PLoS Pathogens article Medicine Burkholderia infections and melioidosis Open access

  20

  citations
• Quality Control and Statistical Evaluation of Combinatorial DNA Libraries using Nanopore Sequencing

  2020 BioTechniques article Biochemistry, Genetics and Molecular Biology Genomics and Phylogenetic Studies Open access

  4

  citations
• Completed Genomic Sequence of Bacillus thuringiensis HER1410 Reveals a Cry -Containing Chromosome, Two Megaplasmids, and an Integrative Plasmidial Prophage

  2020 G3 Genes Genomes Genetics article Agricultural and Biological Sciences Entomopathogenic Microorganisms in Pest Control Open access

  27

  citations
• Oxford Nanopore sequencing: new opportunities for plant genomics?

  2020 Journal of Experimental Botany article Biochemistry, Genetics and Molecular Biology Genomics and Phylogenetic Studies Open access

  83

  citations
• The fully resolved genome of Bacillus thuringiensis HER1410 reveals a cry -containing chromosome, two megaplasmids & an integrative plasmidial prophage

  2020 bioRxiv (Cold Spring Harbor Laboratory) preprint Agricultural and Biological Sciences Entomopathogenic Microorganisms in Pest Control Open access

  0

  citations
• An educational guide for nanopore sequencing in the classroom

  2020 PLoS Computational Biology article Biochemistry, Genetics and Molecular Biology Genetics, Bioinformatics, and Biomedical Research Open access

  32

  citations
• Key Questions for Next-Generation Biomonitoring

  2020 Frontiers in Environmental Science article Environmental Science Ecology and Vegetation Dynamics Studies Open access

  99

  citations

19 results