Contamination in Low Microbial Biomass Microbiome Studies: Issues and Recommendations

• Setting higher standards for reports of microbial species in human cancers

  2026 Nature Cancer article Biochemistry, Genetics and Molecular Biology Gut microbiota and health Open access

  6

  citations
• A blueprint for contemporary studies of microbiomes

  2025 Microbiome editorial Biochemistry, Genetics and Molecular Biology Gut microbiota and health Open access

  40

  citations
• The tumor immune microenvironment in resected treatment-naive pancreatic cancer patients with long-term survival

  2024 Pancreatology article Medicine Pancreatic and Hepatic Oncology Research Open access

  4

  citations
• Field-Based Planetary Protection Operations for Melt Probes: Validation of Clean Access into the Blood Falls, Antarctica, Englacial Ecosystem

  2023 Astrobiology article Environmental Science Polar Research and Ecology

  5

  citations
• Questioning the fetal microbiome illustrates pitfalls of low-biomass microbial studies

  2023 Nature article Biochemistry, Genetics and Molecular Biology Gut microbiota and health Open access cited by 1 patent

  390

  citations
• Gastrointestinal microbiome: Evaluation of testing technologies

  2023 Elsevier eBooks book-chapter Biochemistry, Genetics and Molecular Biology Gut microbiota and health

  0

  citations
• The lower airways microbiota and antimicrobial peptides indicate dysbiosis in sarcoidosis

  2022 Microbiome article Medicine Sarcoidosis and Beryllium Toxicity Research Open access

  18

  citations
• Best practices in metabarcoding of fungi: From experimental design to results

  2022 Molecular Ecology article Agricultural and Biological Sciences Mycorrhizal Fungi and Plant Interactions Open access

  345

  citations
• The Microbiome in Bronchial Biopsies from Smokers and Ex-Smokers with Stable COPD - A Metatranscriptomic Approach

  2022 COPD Journal of Chronic Obstructive Pulmonary Disease article Medicine Chronic Obstructive Pulmonary Disease (COPD) Research Open access

  1

  citations
• The lower airways microbiome and antimicrobial peptides in idiopathic pulmonary fibrosis differ from chronic obstructive pulmonary disease

  2022 PLoS ONE article Medicine Interstitial Lung Diseases and Idiopathic Pulmonary Fibrosis Open access

  13

  citations
• Toward Standards in Clinical Microbiota Studies: Comparison of Three DNA Extraction Methods and Two Bioinformatic Pipelines

  2020 mSystems article Biochemistry, Genetics and Molecular Biology Gut microbiota and health Open access

  68

  citations

11 results