February 06, 2018 article Open access SCANPY: large-scale single-cell gene expression data analysis Genome biology DOI: 10.1186/s13059-017-1382-0 Full text (OA) OpenAlex Authors 0 Author list not loaded yet. Cited by 121 stored of 10,020 Search Sort Most cited Newest Oldest Patent citations Title Any typearticle review book-chapter conference-paper preprint dissertation book dataset other Any fieldAgricultural and Biological Sciences Arts and Humanities Biochemistry, Genetics and Molecular Biology Business, Management and Accounting Chemical Engineering Chemistry Computer Science Decision Sciences Dentistry Earth and Planetary Sciences Economics, Econometrics and Finance Energy Engineering Environmental Science Health Professions Immunology and Microbiology Materials Science Mathematics Medicine Neuroscience Nursing Pharmacology, Toxicology and Pharmaceutics Physics and Astronomy Psychology Social Sciences Veterinary Open access Spatial Transcriptomics Reveals Injured Cells, Signature Genes, and Communication Patterns in the Cyst Microenvironment of Polycystic Kidney Disease 2025 Journal of the American Society of Nephrology article Biochemistry, Genetics and Molecular Biology Genetic and Kidney Cyst Diseases Open access 1 citations Latent plasticity of the human pancreas across development, health, and disease 2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine Pancreatic function and diabetes Open access 5 citations On the benchmarking of clustering algorithms and hyperparameter influence for cell type detection in single-cell RNA sequencing data 2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access 1 citations Intratumoral delivery of 4-1BBL boosts IL-12-triggered anti-glioma immunity 2025 Molecular Therapy article Medicine Glioma Diagnosis and Treatment Open access cited by 1 patent 6 citations GRIDGENE: Guided Region Identification based on Density of GENEs – a transcript density-based approach to characterize tissues by spatial transcriptomics 2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access 3 citations Immunoregulatory Endothelial Cells Interact With T Cells After Myocardial Infarction 2025 Circulation Research article Medicine Cardiac Fibrosis and Remodeling Open access 14 citations Pathology-oriented multiplexing enables integrative disease mapping 2025 Nature article Biochemistry, Genetics and Molecular Biology Cell Image Analysis Techniques Open access 26 citations FOXP1 differentially regulates the development of murine vasopressin and oxytocin magnocellular neurons 2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Psychology Neuroendocrine regulation and behavior Open access 0 citations Impact of Y chromosome loss on the risk of Parkinson's disease and progression 2025 EBioMedicine article Medicine Parkinson's Disease Mechanisms and Treatments Open access 5 citations Protocol to decipher complex spatial transcriptomics data using STMiner 2025 STAR Protocols article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access 0 citations scACCorDiON: a clustering approach for explainable patient level cell–cell communication graph analysis 2025 Bioinformatics article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access 3 citations Intratumoral gene delivery of 4-1BBL boosts IL-12-triggered anti-glioblastoma immunity 2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Medicine Glioma Diagnosis and Treatment Open access 0 citations STMiner: Gene-centric spatial transcriptomics for deciphering tumor tissues 2025 Cell Genomics article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access 10 citations Paired Single-Cell Transcriptome and DNA Barcode Detection in Zebrafish Using ScarTrace 2025 Methods in molecular biology book-chapter Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics 2 citations scAGG: Sample-level embedding and classification of Alzheimer's disease from single-nucleus data 2025 Computational and Structural Biotechnology Journal article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access 2 citations Long-term in vitro expansion of a human fetal pancreas stem cell that generates all three pancreatic cell lineages 2024 Cell article Medicine Pancreatic function and diabetes Open access 32 citations Spatial multi-omics in whole skeletal muscle reveals complex tissue architecture 2024 Communications Biology article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access 18 citations Identification of kidney cell types in scRNA-seq and snRNA-seq data using machine learning algorithms 2024 Heliyon article Biochemistry, Genetics and Molecular Biology Single-cell and spatial transcriptomics Open access 3 citations Neoadjuvant nivolumab or nivolumab plus ipilimumab in early-stage triple-negative breast cancer: a phase 2 adaptive trial 2024 Nature Medicine article Medicine Cancer Immunotherapy and Biomarkers Open access 74 citations Single-cell multiome uncovers differences in glycogen metabolism underlying species-specific speed of development 2024 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Pluripotent Stem Cells Research Open access 1 citations 21–40 of 121 ← Previous Page 2 / 7 Next → References 0