October 11, 2012 article Open access CD-HIT: accelerated for clustering the next-generation sequencing data Bioinformatics DOI: 10.1093/bioinformatics/bts565 Full text (OA) OpenAlex Authors 0 Author list not loaded yet. Cited by 40 stored of 12,332 Search Sort Most cited Newest Oldest Patent citations Title Any typearticle review book-chapter conference-paper preprint dissertation book dataset other Any fieldAgricultural and Biological Sciences Arts and Humanities Biochemistry, Genetics and Molecular Biology Business, Management and Accounting Chemical Engineering Chemistry Computer Science Decision Sciences Dentistry Earth and Planetary Sciences Economics, Econometrics and Finance Energy Engineering Environmental Science Health Professions Immunology and Microbiology Materials Science Mathematics Medicine Neuroscience Nursing Pharmacology, Toxicology and Pharmaceutics Physics and Astronomy Psychology Social Sciences Veterinary Open access Hide and seek: de novo identification in sugar beet reveals impact of non-autonomous LTR retrotransposons 2026 Mobile DNA article Agricultural and Biological Sciences Chromosomal and Genetic Variations Open access 0 citations From gut to brain: data-driven evidence suggests causal contribution of gut-microbiota to major depressive disorder in humans 2026 Gut Microbes article Biochemistry, Genetics and Molecular Biology Gut microbiota and health Open access 0 citations Investigating enzyme function by geometric matching of catalytic motifs 2026 Protein Science article Biochemistry, Genetics and Molecular Biology Protein Structure and Dynamics Open access 0 citations Predictions of protein–protein interactions: Learning sequences and structures 2026 APL Machine Learning article Biochemistry, Genetics and Molecular Biology Machine Learning in Bioinformatics Open access 0 citations No detection of relevant virus-specific DNA or RNA sequences in the placenta 2026 Placenta article Environmental Science Bacteriophages and microbial interactions Open access 0 citations The phylogenetic structure of plant communities drives the belowground transmission of fungal pathogens 2026 New Phytologist article Agricultural and Biological Sciences Mycorrhizal Fungi and Plant Interactions Open access 1 citations Dominant-negative PSMB10 disrupts immunoproteasome assembly and leads to transient T lymphopenia 2026 Journal of Human Immunity article Immunology and Microbiology Immunodeficiency and Autoimmune Disorders Open access 2 citations Hide and seek: de novo identification in sugar beet reveals impact of non-autonomous LTR retrotransposons 2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Agricultural and Biological Sciences Chromosomal and Genetic Variations Open access 0 citations Genome Mining and Pangenome Analysis of the Stutzerimonas Genus: a Novel Source of Plastic-Degrading Enzymes 2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Enzyme Production and Characterization 0 citations Investigating Enzyme Function by Geometric Matching of Catalytic Motifs 2026 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Protein Structure and Dynamics Open access 2 citations LncRNA-BERT: an RNA language model for classifying coding and long non-coding RNA 2026 Connection Science article Biochemistry, Genetics and Molecular Biology Genomics and Phylogenetic Studies Open access 7 citations Effector–host interactome map links type III secretion systems in healthy gut microbiomes to immune modulation 2026 Nature Microbiology article Biochemistry, Genetics and Molecular Biology Gut microbiota and health Open access 4 citations TEtrimmer: a tool to automate the manual curation of transposable elements 2025 Nature Communications article Agricultural and Biological Sciences Chromosomal and Genetic Variations Open access 21 citations Environmental Stresses Constrain Soil Microbial Community Functions by Regulating Deterministic Assembly and Niche Width 2025 Molecular Ecology article Environmental Science Microbial Community Ecology and Physiology Open access 12 citations Functional analysis of ligand-gated chloride channels in a cnidarian sheds light on the evolution of inhibitory signalling 2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Neuroscience Neuroscience and Neuropharmacology Research Open access 0 citations Mesopolyploidy as a taxonomic clade marker for Brassica and relatives (tribe Brassiceae) 2025 Annals of Botany article Agricultural and Biological Sciences Plant Ecology and Taxonomy Studies Open access 3 citations LncRNA-BERT: An RNA Language Model for Classifying Coding and Long Non-Coding RNA 2025 bioRxiv (Cold Spring Harbor Laboratory) preprint Biochemistry, Genetics and Molecular Biology Genomics and Phylogenetic Studies Open access 4 citations TEtrimmer: a novel tool to automate the manual curation of transposable elements 2024 bioRxiv (Cold Spring Harbor Laboratory) preprint Agricultural and Biological Sciences Chromosomal and Genetic Variations Open access 7 citations The Madagascar palm genome provides new insights on the evolution of Apocynaceae specialized metabolism 2024 Heliyon article Agricultural and Biological Sciences Chromosomal and Genetic Variations Open access 8 citations Distinct regulatory networks control toxin gene expression in elapid and viperid snakes 2024 BMC Genomics article Biochemistry, Genetics and Molecular Biology Venomous Animal Envenomation and Studies Open access 11 citations 1–20 of 40 Page 1 / 2 Next → References 0