PeptidePicker: A scientific workflow with web interface for selecting appropriate peptides for targeted proteomics experiments

• Enabling Variant Proteogenomic Assay Development Through a Peptide Target Selection Pipeline and Web Application

  2026 PROTEOMICS article Chemistry Advanced Proteomics Techniques and Applications Open access

  0

  citations
• Absolute quantitative proteomics identifies patterns of plasma proteins associated with venous thromboembolism in patients with colorectal cancer

  2026 Thrombosis Research article Medicine Venous Thromboembolism Diagnosis and Management Open access

  1

  citations
• MRMAssayDB: a comprehensive integrated resource for targeted proteomics assays

  2025 Expert Review of Proteomics article Chemistry Advanced Proteomics Techniques and Applications Open access

  2

  citations
• Strategies to verify equimolar peptide release in mass spectrometry-based protein quantification exemplified for apolipoprotein(a)

  2024 Clinical Chemistry and Laboratory Medicine (CCLM) article Chemistry Advanced Proteomics Techniques and Applications Open access

  1

  citations
• Quantitative protein mass spectrometry for multiplex measurement of coagulation and fibrinolytic proteins towards clinical application: What, why and how?

  2024 Thrombosis Research article Medicine Blood Coagulation and Thrombosis Mechanisms Open access

  3

  citations
• Multiple reaction monitoring assays for large-scale quantitation of proteins from 20 mouse organs and tissues

  2024 Communications Biology article Chemistry Advanced Proteomics Techniques and Applications Open access

  12

  citations
• Proteomic Evolution from Acute to Post-COVID-19 Conditions

  2023 Journal of Proteome Research article Medicine Long-Term Effects of COVID-19 Open access

  8

  citations
• Absolute Quantitative Targeted Proteomics Assays for Plasma Proteins

  2023 Methods in molecular biology book-chapter Chemistry Advanced Proteomics Techniques and Applications

  10

  citations
• Bioinformatics Tools and Knowledgebases to Assist Generating Targeted Assays for Plasma Proteomics

  2023 Methods in molecular biology book-chapter Chemistry Advanced Proteomics Techniques and Applications

  1

  citations
• Development of Tier 2 LC-MRM-MS protein quantification methods for liquid biopsies

  2022 Journal of Mass Spectrometry and Advances in the Clinical Lab article Chemistry Advanced Proteomics Techniques and Applications Open access

  5

  citations
• Early Prediction of COVID-19 Patient Survival by Targeted Plasma Multi-Omics and Machine Learning

  2022 Molecular & Cellular Proteomics article Medicine COVID-19 Clinical Research Studies Open access

  48

  citations
• Longitudinal Plasma Proteomics Analysis Reveals Novel Candidate Biomarkers in Acute COVID-19

  2022 Journal of Proteome Research article Medicine COVID-19 Clinical Research Studies Open access

  42

  citations
• Targeted proteomics for evaluating risk of venous thrombosis following traumatic lower‐leg injury or knee arthroscopy

  2021 Journal of Thrombosis and Haemostasis article Medicine Venous Thromboembolism Diagnosis and Management Open access

  19

  citations
• Proteotyping of knockout mouse strains reveals sex- and strain-specific signatures in blood plasma

  2021 npj Systems Biology and Applications article Chemistry Advanced Proteomics Techniques and Applications Open access

  7

  citations
• An Update on MRMAssayDB: A Comprehensive Resource for Targeted Proteomics Assays in the Community

  2021 Journal of Proteome Research article Chemistry Advanced Proteomics Techniques and Applications Open access

  23

  citations
• Mouse Quantitative Proteomics Knowledgebase: reference protein concentration ranges in 20 mouse tissues using 5000 quantitative proteomics assays

  2021 Bioinformatics article Chemistry Advanced Proteomics Techniques and Applications

  8

  citations
• Systematic Optimization of the iMALDI Workflow for the Robust and Straightforward Quantification of Signaling Proteins in Cancer Cells

  2020 PROTEOMICS - CLINICAL APPLICATIONS article Chemistry Mass Spectrometry Techniques and Applications Open access

  9

  citations
• Plasma Protein Signatures of a Murine Venous Thrombosis Model and Slc44a2 Knockout Mice Using Quantitative-Targeted Proteomics

  2020 Thrombosis and Haemostasis article Medicine Blood Coagulation and Thrombosis Mechanisms

  14

  citations
• Determination of the concentration range for 267 proteins from 21 lots of commercial human plasma using highly multiplexed multiple reaction monitoring mass spectrometry

  2020 The Analyst article Chemistry Advanced Proteomics Techniques and Applications Open access cited by 3 patents

  51

  citations

19 results